Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 2.5e-97 359.0 213 100.0
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 1.6e-75 286.6 211 79.1
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 6.1e-75 284.6 219 74.4
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 7.9e-75 284.3 211 76.8
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 5.1e-74 281.6 211 76.8
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 8.7e-74 280.8 211 73.9
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 5.7e-73 278.1 211 75.4
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 3.9e-66 255.4 203 70.0
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 2.0e-65 253.1 211 68.2
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 2.5e-65 252.7 197 69.0
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 2.5e-65 252.7 211 67.8
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 1.7e-64 250.0 213 68.1
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 1.4e-63 246.9 214 66.8
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 1.4e-63 246.9 207 67.6
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 3.1e-63 245.7 211 65.9
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 4.1e-63 245.4 212 67.0
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 4.1e-63 245.4 219 66.7
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 5.3e-63 245.0 213 65.7
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 4.5e-62 241.9 211 66.8
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.7e-61 240.0 211 65.4
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.7e-61 240.0 211 65.9
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 2.9e-61 239.2 211 65.4
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 3.8e-61 238.8 211 66.4
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 5.0e-61 238.4 209 67.0
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.1e-60 237.3 207 64.7
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 1.1e-60 237.3 214 64.0
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.4e-60 236.9 211 66.4
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 1.9e-60 236.5 213 64.8
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 4.2e-60 235.3 213 65.3
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 7.2e-60 234.6 211 64.0
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 1.6e-59 233.4 223 61.0
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 1.6e-59 233.4 211 64.9
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 4.7e-59 231.9 211 65.4
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 6.1e-59 231.5 167 74.9
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 1.8e-58 229.9 216 62.5
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 2.3e-58 229.6 209 65.6
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 2.3e-58 229.6 214 62.6
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 5.1e-58 228.4 213 63.8
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 1.1e-57 227.3 212 63.7
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 2.6e-57 226.1 254 57.5
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 7.4e-57 224.6 211 61.1
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 9.7e-57 224.2 210 59.0
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 1.3e-56 223.8 209 64.1
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 2.2e-56 223.0 211 63.5
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 3.7e-56 222.2 169 69.8
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 3.7e-56 222.2 210 60.5
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 3.7e-56 222.2 211 63.5
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 6.3e-56 221.5 209 60.3
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 8.2e-56 221.1 225 58.7
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 2.4e-55 219.5 210 58.6
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 2.4e-55 219.5 194 62.9
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 3.1e-55 219.2 185 65.9
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 7.0e-55 218.0 209 65.1
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 2.0e-54 216.5 177 65.5
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 2.0e-54 216.5 209 64.1
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 2.6e-54 216.1 208 60.1
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 4.5e-54 215.3 212 59.4
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 7.7e-54 214.5 174 69.0
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 3.8e-53 212.2 215 59.1
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 5.0e-53 211.8 215 57.7
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 5.0e-53 211.8 214 57.5
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 1.1e-52 210.7 212 56.1
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 4.2e-52 208.8 214 57.0
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 5.5e-52 208.4 236 53.8
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 5.5e-52 208.4 211 60.7
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 2.7e-51 206.1 213 57.3
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 2.3e-50 203.0 214 56.1
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 5.2e-50 201.8 212 54.2
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 6.7e-50 201.4 214 57.5
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 4.4e-49 198.7 154 75.3
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 1.7e-48 196.8 211 59.7
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 1.4e-47 193.7 202 55.9
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 5.3e-47 191.8 211 53.6
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 7.0e-47 191.4 170 65.9
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 1.2e-46 190.7 211 59.2
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.1e-44 184.1 212 54.7
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 2.5e-44 183.0 216 55.1
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 7.2e-44 181.4 145 69.7
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 6.1e-43 178.3 215 54.9
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 6.1e-43 178.3 207 60.9
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 1.8e-42 176.8 151 64.2
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 6.8e-42 174.9 214 60.3
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 8.8e-42 174.5 154 64.9
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 8.8e-42 174.5 157 65.6
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 4.4e-41 172.2 151 63.6
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 9.8e-41 171.0 211 50.2
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.3e-40 170.6 205 50.7
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 2.8e-40 169.5 171 57.9
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 6.3e-40 168.3 215 50.2
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 8.3e-40 167.9 158 60.8
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 5.4e-39 165.2 211 58.8
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.2e-38 164.1 148 61.5
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.7e-38 162.9 146 62.3
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 4.5e-38 162.2 201 49.8
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 4.5e-38 162.2 155 61.3
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 8.5e-37 157.9 174 51.7
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.9e-36 156.8 197 48.2
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 3.2e-36 156.0 207 45.4
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 6.1e-35 151.8 208 41.3
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 1.8e-34 150.2 174 58.0
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 5.2e-34 148.7 155 56.8
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 7.0e-31 138.3 214 54.2
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 4.5e-30 135.6 163 53.4
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 5.0e-29 132.1 208 51.9
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 7.3e-28 128.3 169 56.8
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 2.0e-22 110.2 187 36.9
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 2.8e-19 99.8 101 56.4
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 3.6e-19 99.4 208 38.0
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.8e-18 97.1 201 38.3
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 3.1e-18 96.3 122 50.8
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.3e-16 90.9 101 56.4
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.3e-16 88.2 173 37.0
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 4.1e-15 85.9 148 35.8
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.6e-14 84.0 84 61.9
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 4.3e-12 75.9 68 61.8
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.8e-10 70.5 76 59.2
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.9e-08 63.2 167 33.5
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 2.9e-08 63.2 57 57.9
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 2.4e-07 60.1 42 76.2
BraA05t20121Z Brassica rapa HOM05D006133 ORTHO05D007855 2.4e-07 60.1 48 66.7
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.4e-07 60.1 167 32.3
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.6e-06 57.4 55 54.5
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 4.6e-06 55.8 44 65.9


User provided reference genes

Program Settings