Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.8e-246 854.0 413 100.0
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.6e-159 565.8 457 68.1
CSS0003893 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.4e-29 133.3 125 54.4
CSS0007903 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 8.2e-28 129.0 227 37.9
CSS0022885 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 1.2e-26 125.2 222 37.8
CSS0018973 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 1.0e-25 122.1 222 37.4
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 2.5e-24 117.5 112 50.9
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 7.2e-24 115.9 153 44.4
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.4e-21 106.7 144 42.4
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.8e-19 101.3 148 41.2
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 4.1e-19 100.1 102 49.0
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-18 97.8 214 34.6
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 1.3e-17 95.1 139 39.6
CSS0020711 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D006370 4.7e-15 86.7 89 47.2
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.0e-14 85.5 119 40.3
CSS0045948 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 4.4e-13 80.1 78 52.6
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 5.7e-13 79.7 117 35.9
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 1.3e-12 78.6 119 40.3
CSS0026714 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 3.7e-12 77.0 199 32.2
CSS0017728 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D013045 2.4e-11 74.3 113 38.9
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.4e-11 73.2 117 37.6
CSS0001128 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D111383 7.0e-11 72.8 189 31.7
CSS0023159 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 9.2e-11 72.4 220 32.7
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 9.2e-11 72.4 183 27.3
CSS0022480 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D013045 2.0e-10 71.2 113 38.1
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.5e-10 70.5 160 31.9
CSS0006768 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 5.9e-10 69.7 199 30.7
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 7.8e-10 69.3 116 32.8
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-09 68.6 120 33.3
CSS0003278 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.7e-09 68.2 68 50.0
CSS0048052 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 1.7e-09 68.2 175 28.6
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.9e-09 67.4 106 34.9
CSS0010442 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 5.0e-09 66.6 213 34.7
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 6.6e-09 66.2 108 30.6
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 8.6e-09 65.9 120 32.5
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 8.6e-09 65.9 74 41.9
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.6e-09 65.9 112 36.6
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 8.6e-09 65.9 115 31.3
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.6e-09 65.9 115 31.3
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.6e-09 65.9 115 31.3
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.6e-09 65.9 115 31.3
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.5e-08 65.1 134 32.1
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.5e-08 65.1 105 35.2
CSS0026648 Camellia sinensis var. sinensis HOM05D017771 ORTHO05D013045 1.9e-08 64.7 89 46.1
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 3.3e-08 63.9 97 35.1
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.3e-08 63.9 107 33.6
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 5.6e-08 63.2 107 34.6
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 7.3e-08 62.8 113 31.0
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 1.2e-07 62.0 94 37.2
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.6e-07 61.6 147 29.9
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-07 61.2 75 40.0
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-07 60.8 96 32.3
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 3.6e-07 60.5 120 30.0
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 4.7e-07 60.1 64 43.8
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 8.0e-07 59.3 73 39.7
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.0e-07 59.3 114 27.2
HanXRQChr16g0525111 Helianthus annuus HOM05D003915 ORTHO05D005386 1.0e-06 58.9 109 31.2
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 1.0e-06 58.9 101 35.6
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 1.4e-06 58.5 68 36.8
PGSC0003DMG400035061 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.4e-06 58.5 75 38.7
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.4e-06 58.5 71 35.2
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 1.8e-06 58.2 129 31.8
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 1.8e-06 58.2 116 30.2
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.0e-06 57.4 317 22.1
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 4.0e-06 57.0 133 30.1
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 6.8e-06 56.2 74 37.8
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 6.8e-06 56.2 74 37.8
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 6.8e-06 56.2 108 31.5
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 8.9e-06 55.8 108 31.5
Nitab4.5_0026746g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.9e-06 55.8 128 32.0
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.9e-06 55.8 68 35.3


User provided reference genes

Program Settings