Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042252 Camellia sinensis var. sinensis HOM05D007496 ORTHO05D009479 9.6e-57 225.7 112 100.0
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 5.3e-47 193.4 112 83.9
Actinidia38410 Actinidia chinensis HOM05D007496 ORTHO05D009479 2.6e-46 191.0 111 83.8
Rhsim09G0071100 Rhododendron simsii HOM05D007496 ORTHO05D009479 6.4e-45 186.4 112 80.4
Dinv28147 Davidia involucrata HOM05D007496 ORTHO05D009479 2.7e-43 181.0 101 86.1
Haze_01569 Corylus avellana HOM05D007496 ORTHO05D009479 5.8e-38 163.3 112 69.6
Cfa021290 Carpinus fangiana HOM05D007496 ORTHO05D009479 7.6e-38 162.9 112 68.8
QL03p041883 Quercus lobata HOM05D007496 ORTHO05D009479 1.1e-36 159.1 109 68.8
Prupe.1G342600 Prunus persica HOM05D007496 ORTHO05D009479 2.4e-36 157.9 105 73.3
MD13G1010200 Malus domestica HOM05D007496 ORTHO05D009479 4.6e-35 153.7 105 70.5
Aa31LG2G7790 Aethionema arabicum HOM05D007496 ORTHO05D009479 7.9e-35 152.9 112 62.5
CiPaw.05G161700 Carya illinoinensis HOM05D007496 ORTHO05D009479 1.3e-34 152.1 111 67.6
CsaV3_5G017450 Cucumis sativus L. HOM05D007496 ORTHO05D009479 1.3e-34 152.1 115 60.9
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 1.8e-34 151.8 112 63.4
MELO3C033967.2 Cucumis melo HOM05D007496 ORTHO05D009479 2.3e-34 151.4 115 60.9
Sed0014874 Sechium edule HOM05D007496 ORTHO05D009479 2.3e-34 151.4 115 63.5
Potri.010G098400 Populus trichocarpa HOM05D007496 ORTHO05D009479 6.7e-34 149.8 111 64.9
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 8.7e-34 149.4 105 67.6
Sabra10G0070900 Salix brachista HOM05D007496 ORTHO05D009479 2.5e-33 147.9 105 67.6
Manes.10G064000 Manihot esculenta HOM05D007496 ORTHO05D009479 5.6e-33 146.7 112 63.4
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 5.6e-33 146.7 112 60.7
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 1.6e-32 145.2 112 61.6
CiPaw.05G161800 Carya illinoinensis HOM05D007496 ORTHO05D009479 2.1e-32 144.8 112 66.1
PGSC0003DMG401017024 Solanum tuberosum HOM05D007496 ORTHO05D009479 2.1e-32 144.8 109 65.1
PGSC0003DMG402017024 Solanum tuberosum HOM05D007496 ORTHO05D009479 2.1e-32 144.8 109 65.1
ClCG01G007050 Citrullus lanatus HOM05D007496 ORTHO05D009479 2.8e-32 144.4 115 57.4
Solyc02g021270.3 Solanum lycopersicum HOM05D007496 ORTHO05D009479 2.8e-32 144.4 112 62.5
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 6.2e-32 143.3 112 60.7
Glyma.08G090700 Glycine max HOM05D007496 ORTHO05D009479 8.1e-32 142.9 111 61.3
TAR636G1662 Trochodendron aralioides HOM05D007496 ORTHO05D009479 8.1e-32 142.9 105 63.8
BcaC06g34078 Brassica carinata HOM05D007496 ORTHO05D009479 1.4e-31 142.1 112 60.7
C07p33010 Brassica napus HOM05D007496 ORTHO05D009479 1.4e-31 142.1 112 60.7
BolC7t43809H Brassica oleracea HOM05D007496 ORTHO05D009479 1.4e-31 142.1 112 60.7
Nn1g01012 Nelumbo nucifera HOM05D007496 ORTHO05D009479 1.4e-31 142.1 101 64.4
Aqoxy5G03884 Aquilegia oxysepala HOM05D007496 ORTHO05D009479 1.8e-31 141.7 103 66.0
Atru.chr11.1049 Acer truncatum HOM05D007496 ORTHO05D009479 3.1e-31 141.0 104 67.3
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 4.0e-31 140.6 115 58.3
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 6.9e-31 139.8 112 60.7
Cc10_g12620 Coffea canephora HOM05D007496 ORTHO05D009479 6.9e-31 139.8 114 56.1
Sopen02g005740 Solanum pennellii HOM05D007496 ORTHO05D009479 6.9e-31 139.8 109 63.3
Ciclev10004591m.g Citrus clementina HOM05D007496 ORTHO05D009479 1.2e-30 139.0 113 65.5
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 1.5e-30 138.7 112 60.7
AUR62017779 Chenopodium quinoa HOM05D007496 ORTHO05D009479 1.5e-30 138.7 112 59.8
Nitab4.5_0002936g0010 Nicotiana tabacum HOM05D007496 ORTHO05D009479 1.5e-30 138.7 109 64.2
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 3.4e-30 137.5 112 58.0
BcaC06g31248 Brassica carinata HOM05D007496 ORTHO05D009479 1.7e-29 135.2 113 60.2
Lalb_Chr07g0188091 Lupinus albus HOM05D007496 ORTHO05D009479 2.2e-29 134.8 104 61.5
RcHm_v2.0_Chr4g0446071 Rosa chinensis HOM05D007496 ORTHO05D009479 2.2e-29 134.8 105 62.9
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 2.9e-29 134.4 101 64.4
Phvul.002G186700 Phaseolus vulgaris HOM05D007496 ORTHO05D009479 2.9e-29 134.4 109 58.7
Nitab4.5_0000415g0080 Nicotiana tabacum HOM05D007496 ORTHO05D009479 3.8e-29 134.0 106 64.2
FAN17G2862 Fragaria x ananassa HOM05D007496 ORTHO05D009479 4.9e-29 133.7 104 62.5
FAN07G1579 Fragaria x ananassa HOM05D007496 ORTHO05D009479 8.4e-29 132.9 105 61.0
Lj4g0018028 Lotus japonicus HOM05D007496 ORTHO05D009479 8.4e-29 132.9 104 62.5
FAN17G2962 Fragaria x ananassa HOM05D007496 ORTHO05D009479 1.1e-28 132.5 105 61.0
FvH4_4g36310 Fragaria vesca HOM05D007496 ORTHO05D009479 1.4e-28 132.1 104 62.5
FAN12G2685 Fragaria x ananassa HOM05D007496 ORTHO05D009479 1.4e-28 132.1 104 62.5
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.4e-28 132.1 89 70.8
Gohir.D12G156100 Gossypium hirsutum HOM05D007496 ORTHO05D009479 1.9e-28 131.7 106 60.4
Gorai.008G168700 Gossypium raimondii HOM05D007496 ORTHO05D009479 1.9e-28 131.7 106 60.4
Ah.02g120040 Amaranthus hybridus HOM05D007496 ORTHO05D009479 3.2e-28 131.0 101 60.4
Migut.L00784 Erythranthe guttata HOM05D007496 ORTHO05D009479 3.2e-28 131.0 117 53.0
Peaxi162Scf00655g00032 Petunia axillaris HOM05D007496 ORTHO05D009479 3.2e-28 131.0 99 64.6
VMungo0251G1188 Vigna mungo HOM05D007496 ORTHO05D009479 3.2e-28 131.0 111 55.9
Gohir.A12G152700 Gossypium hirsutum HOM05D007496 ORTHO05D009479 4.2e-28 130.6 103 61.2
Psat0s1866g0040 Pisum sativum HOM05D007496 ORTHO05D009479 5.5e-28 130.2 108 58.3
TPR.G34766 Trifolium pratense HOM05D007496 ORTHO05D009479 7.1e-28 129.8 107 59.8
Lalb_Chr13g0293071 Lupinus albus HOM05D007496 ORTHO05D009479 1.6e-27 128.6 104 58.7
arahy.Tifrunner.gnm1.ann1.UN0AT6 Arachis hypogaea HOM05D007496 ORTHO05D009479 2.1e-27 128.3 104 58.7
Ca_18211_v3 Cicer arietinum L. HOM05D007496 ORTHO05D009479 2.7e-27 127.9 104 56.7
PSO782G5018 Papaver somniferum HOM05D007496 ORTHO05D009479 3.5e-27 127.5 98 60.2
Thecc.02G296100 Theobroma cacao HOM05D007496 ORTHO05D009479 3.5e-27 127.5 91 70.3
CARHR144810 Cardamine hirsuta HOM05D007496 ORTHO05D009479 6.0e-27 126.7 89 68.5
PSO063G5648 Papaver somniferum HOM05D007496 ORTHO05D009479 7.9e-27 126.3 98 60.2
SalBow2G0206 Salvia bowleyana HOM05D007496 ORTHO05D009479 1.0e-26 125.9 111 55.9
SHI14851 Sapria himalayana HOM05D007496 ORTHO05D009479 1.3e-26 125.6 112 54.5
MBI04_g09492_MAGBIO Magnolia biondii HOM05D007496 ORTHO05D009479 6.7e-26 123.2 105 58.1
SGA_v2.0_scaffold169G38601 Striga asiatica HOM05D007496 ORTHO05D009479 6.7e-26 123.2 112 55.4
SGA_v2.0_scaffold4G02164 Striga asiatica HOM05D007496 ORTHO05D009479 8.7e-26 122.9 107 57.0
CAN.G1013.31 Capsicum annuum HOM05D007496 ORTHO05D009479 1.1e-25 122.5 124 52.4
Lsat_1_v5_gn_3_27601 Lactuca sativa HOM05D007496 ORTHO05D009479 1.1e-25 122.5 96 61.5
Oeu001125.1 Olea europaea HOM05D007496 ORTHO05D009479 1.5e-25 122.1 99 60.6
MSTRG.20095 Avicennia marina HOM05D007496 ORTHO05D009479 4.3e-25 120.6 111 53.2
Sc03g0005490 Simmondsia chinensis HOM05D007496 ORTHO05D009479 5.7e-25 120.2 95 62.1
COL.COLO4_27514 Corchorus olitorius HOM05D007496 ORTHO05D009479 1.4e-23 115.5 101 61.4
TPR.G33063 Trifolium pratense HOM05D007496 ORTHO05D009479 2.0e-22 111.7 97 59.8
ECA246G1804 Erigeron canadensis HOM05D007496 ORTHO05D009479 1.7e-21 108.6 84 61.9
Actinidia13702 Actinidia chinensis HOM05D007496 ORTHO05D009479 5.0e-21 107.1 66 81.8
HPP92_012737 Vanilla planifolia HOM05D007496 ORTHO05D009479 1.9e-20 105.1 106 51.9
HanXRQChr14g0446881 Helianthus annuus HOM05D007496 ORTHO05D009479 3.2e-20 104.4 85 61.2
ATR0317G062 Amborella trichopoda HOM05D007496 ORTHO05D009479 7.2e-20 103.2 113 43.4
arahy.Tifrunner.gnm1.ann1.0U1JLE Arachis hypogaea HOM05D007496 ORTHO05D009479 1.0e-18 99.4 68 67.6
GSVIVG01010244001 Vitis vinifera HOM05D007496 ORTHO05D009479 8.2e-16 89.7 59 69.5
Actinidia13695 Actinidia chinensis HOM05D007496 ORTHO05D018209 2.2e-13 81.6 51 76.5
Glyma.05G135601 Glycine max HOM05D007496 ORTHO05D009479 1.1e-12 79.3 62 61.3
CDE12G0616 Ceratophyllum demersum HOM05D007496 ORTHO05D009479 2.5e-12 78.2 64 54.7
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 4.2e-12 77.4 103 39.8
Sed0014013 Sechium edule HOM05D007893 ORTHO05D010042 1.8e-07 62.0 118 30.5
BraA01t01749Z Brassica rapa HOM05D003050 ORTHO05D003513 1.5e-06 58.9 99 28.3
Gohir.D04G161400 Gossypium hirsutum HOM05D006931 ORTHO05D008782 2.0e-06 58.5 111 27.0
Gorai.012G149400 Gossypium raimondii HOM05D006931 ORTHO05D008782 2.0e-06 58.5 111 27.0
RcHm_v2.0_Chr4g0445191 Rosa chinensis HOM05D007063 ORTHO05D008822 2.0e-06 58.5 66 50.0
Gohir.A04G119800 Gossypium hirsutum HOM05D006931 ORTHO05D008782 2.6e-06 58.2 111 27.0
C01p22740 Brassica napus HOM05D003050 ORTHO05D003513 3.4e-06 57.8 99 27.3
Lsat_1_v5_gn_8_36881 Lactuca sativa HOM05D006040 ORTHO05D007134 5.9e-06 57.0 107 29.0
A01p17940 Brassica napus HOM05D003050 ORTHO05D003513 7.7e-06 56.6 99 27.3


User provided reference genes

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