Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 2.1e-62 242.3 130 100.0
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 1.0e-45 186.8 128 77.3
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 1.7e-43 179.5 127 76.4
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-40 169.9 128 72.7
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 2.5e-39 165.6 129 69.8
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.6e-38 162.9 125 70.4
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 2.1e-38 162.5 128 68.0
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 2.1e-38 162.5 123 70.7
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 3.6e-38 161.8 162 60.5
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 4.7e-38 161.4 123 69.1
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.1e-37 160.2 127 68.5
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.1e-37 160.2 128 68.8
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.1e-37 160.2 125 69.6
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.8e-37 159.5 127 66.9
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.8e-37 159.5 127 70.9
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 4.0e-37 158.3 128 66.4
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 4.0e-37 158.3 125 68.8
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 5.2e-37 157.9 127 66.9
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 5.2e-37 157.9 125 68.0
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 8.9e-37 157.1 129 63.6
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 1.2e-36 156.8 130 63.1
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 2.0e-36 156.0 128 64.1
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.0e-36 156.0 128 63.3
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 2.6e-36 155.6 126 67.5
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 3.4e-36 155.2 125 64.8
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 4.4e-36 154.8 125 64.0
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 7.5e-36 154.1 133 64.7
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 1.3e-35 153.3 123 66.7
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.7e-35 152.9 128 61.7
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 2.2e-35 152.5 115 72.2
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 3.7e-35 151.8 124 65.3
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 4.9e-35 151.4 128 60.9
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 8.3e-35 150.6 134 63.4
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 2.4e-34 149.1 124 64.5
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 2.4e-34 149.1 125 64.8
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 3.2e-34 148.7 129 60.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 4.1e-34 148.3 126 61.9
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 5.4e-34 147.9 127 62.2
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 9.2e-34 147.1 123 61.0
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 1.2e-33 146.7 129 60.5
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 2.1e-33 146.0 126 59.5
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 2.1e-33 146.0 130 60.8
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 2.7e-33 145.6 122 62.3
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.7e-33 145.6 125 63.2
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 4.6e-33 144.8 123 62.6
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 6.0e-33 144.4 135 57.8
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 6.0e-33 144.4 123 64.2
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 7.8e-33 144.1 125 61.6
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 7.8e-33 144.1 125 61.6
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.0e-32 143.7 128 57.8
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.3e-32 143.3 123 61.0
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 2.3e-32 142.5 130 62.3
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 2.3e-32 142.5 127 59.8
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 3.0e-32 142.1 124 59.7
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 3.0e-32 142.1 129 58.9
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 3.9e-32 141.7 130 58.5
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 5.1e-32 141.4 149 54.4
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 6.6e-32 141.0 124 58.9
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 8.6e-32 140.6 122 61.5
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 1.5e-31 139.8 126 60.3
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 1.5e-31 139.8 129 57.4
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 1.9e-31 139.4 128 56.2
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 3.3e-31 138.7 127 61.4
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.3e-31 138.7 135 56.3
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 4.3e-31 138.3 128 56.2
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 5.6e-31 137.9 144 54.9
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 9.5e-31 137.1 129 57.4
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 9.5e-31 137.1 138 54.3
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 1.2e-30 136.7 128 59.4
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 1.2e-30 136.7 128 59.4
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 2.1e-30 136.0 128 56.2
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 2.8e-30 135.6 128 58.6
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 2.8e-30 135.6 124 55.6
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.8e-30 135.6 129 52.7
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 3.6e-30 135.2 127 59.1
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 4.7e-30 134.8 122 59.0
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 6.2e-30 134.4 128 58.6
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 6.2e-30 134.4 127 57.5
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 6.2e-30 134.4 127 56.7
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 8.1e-30 134.0 127 58.3
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.4e-29 133.3 127 55.9
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 4.0e-29 131.7 124 55.6
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 4.0e-29 131.7 124 55.6
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 4.0e-29 131.7 124 55.6
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 6.8e-29 131.0 129 58.1
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 6.8e-29 131.0 127 56.7
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 1.5e-28 129.8 126 56.3
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 2.0e-28 129.4 128 54.7
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 4.4e-28 128.3 128 57.8
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 5.8e-28 127.9 129 51.2
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 5.8e-28 127.9 124 57.3
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 9.9e-28 127.1 128 52.3
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 6.4e-27 124.4 111 57.7
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 8.3e-27 124.0 118 58.5
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 4.1e-26 121.7 127 54.3
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 7.1e-26 120.9 99 62.6
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 4.6e-25 118.2 80 68.8
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 5.1e-24 114.8 81 70.4
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 8.6e-24 114.0 166 42.8
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 4.3e-23 111.7 80 70.0
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 1.4e-21 106.7 99 54.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 3.4e-20 102.1 79 63.3
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 5.4e-18 94.7 73 63.0
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 6.6e-16 87.8 125 43.2
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 6.6e-16 87.8 125 42.4
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 1.3e-14 83.6 138 43.5
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 3.6e-14 82.0 98 44.9
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 8.1e-14 80.9 96 46.9
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.4e-13 80.1 116 42.2
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 5.3e-13 78.2 116 43.1
Actinidia40026 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.2e-11 72.8 61 63.9
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 3.8e-11 72.0 116 37.9
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 1.4e-10 70.1 114 42.1
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 5.4e-10 68.2 87 47.1
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 9.3e-10 67.4 98 44.9
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 9.3e-10 67.4 98 44.9
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 6.0e-09 64.7 87 46.0
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.7e-08 63.2 87 44.8
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 5.1e-08 61.6 89 43.8
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 1.6e-06 56.6 40 65.0
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 3.6e-06 55.5 47 63.8


User provided reference genes

Program Settings