Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042215 Camellia sinensis var. sinensis HOM05D033051 ORTHO05D000283 5.9e-82 307.4 143 100.0
CSS0043034 Camellia sinensis var. sinensis HOM05D033051 ORTHO05D000283 1.2e-42 176.8 126 65.9
CSS0033040 Camellia sinensis var. sinensis HOM05D033051 ORTHO05D000283 3.5e-42 175.3 126 65.1
CSS0025070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 2.4e-19 99.4 98 42.9
CSS0042628 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 3.0e-17 92.4 96 41.7
CSS0035302 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 3.9e-17 92.0 96 41.7
CSS0007060 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 6.6e-17 91.3 96 41.7
CSS0007584 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 1.9e-16 89.7 96 40.6
CSS0039277 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 1.9e-16 89.7 53 73.6
CSS0022407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 4.3e-16 88.6 96 40.6
Dinv24659 Davidia involucrata HOM05D024841 ORTHO05D000283 8.1e-15 84.3 96 36.5
vmacro07114 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 8.1e-15 84.3 98 41.8
CSS0030553 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 1.1e-14 84.0 96 39.6
CSS0048680 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 4.0e-14 82.0 96 39.6
Oeu054808.1 Olea europaea HOM05D000003 ORTHO05D000283 4.4e-13 78.6 94 37.2
Atru.chr3.2014 Acer truncatum HOM05D000003 ORTHO05D000283 2.2e-12 76.3 94 35.1
Dinv07814 Davidia involucrata HOM05D000003 ORTHO05D000283 2.2e-12 76.3 96 34.4
Dinv07096 Davidia involucrata HOM05D009736 ORTHO05D000283 1.1e-11 73.9 94 38.3
Oeu001880.1 Olea europaea HOM05D000003 ORTHO05D000283 1.1e-11 73.9 98 35.7
Duzib150G0793 Durio zibethinus HOM05D000003 ORTHO05D000283 2.4e-11 72.8 98 34.7
Rhsim10G0040700 Rhododendron simsii HOM05D000068 ORTHO05D000084 9.2e-11 70.9 94 35.1
Atru.chr7.164 Acer truncatum HOM05D000003 ORTHO05D000283 1.2e-10 70.5 94 34.0
Potri.010G000101 Populus trichocarpa HOM05D000003 ORTHO05D000004 2.1e-10 69.7 67 43.3
Dinv04241 Davidia involucrata HOM05D013547 ORTHO05D000283 2.7e-10 69.3 96 31.2
Atru.chr5.1992 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-10 68.2 94 31.9
Sabra16G0322000 Salix brachista HOM05D000003 ORTHO05D000007 6.0e-10 68.2 124 33.1
Dinv12779 Davidia involucrata HOM05D009100 ORTHO05D010712 7.8e-10 67.8 84 35.7
THA.LOC109116848 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.3e-09 67.0 54 46.3
Dinv09491 Davidia involucrata HOM05D013557 ORTHO05D015636 1.7e-09 66.6 87 33.3
Dinv12212 Davidia involucrata HOM05D007697 ORTHO05D008693 1.7e-09 66.6 65 43.1
ECA247G2846 Erigeron canadensis HOM05D001055 ORTHO05D000867 1.7e-09 66.6 95 32.6
Oeu023303.1 Olea europaea HOM05D000003 ORTHO05D000283 1.7e-09 66.6 98 33.7
Sabra07G0063500 Salix brachista HOM05D000003 ORTHO05D000283 1.7e-09 66.6 97 38.1
vmacro10184 Vaccinium macrocarpon HOM05D000049 ORTHO05D000283 1.7e-09 66.6 83 34.9
Atru.chr5.1984 Acer truncatum HOM05D000003 ORTHO05D000283 3.0e-09 65.9 94 31.9
ECA234G2360 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.0e-09 65.9 92 32.6
Potri.004G000150 Populus trichocarpa HOM05D000003 ORTHO05D000283 3.9e-09 65.5 95 36.8
Oeu010858.1 Olea europaea HOM05D000003 ORTHO05D000283 5.1e-09 65.1 59 47.5
Oeu061659.1 Olea europaea HOM05D000003 ORTHO05D000283 5.1e-09 65.1 75 37.3
Sabra09G0132000 Salix brachista HOM05D000003 ORTHO05D000283 5.1e-09 65.1 95 34.7
Aqoxy7G02776 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 8.6e-09 64.3 105 33.3
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 8.6e-09 64.3 48 56.2
Sabra04G0116100 Salix brachista HOM05D000003 ORTHO05D000283 8.6e-09 64.3 97 34.0
Sabra07G0094000 Salix brachista HOM05D000003 ORTHO05D000283 8.6e-09 64.3 93 35.5
Sp2g02500 Schrenkiella parvula HOM05D000003 ORTHO05D000283 8.6e-09 64.3 98 32.7
TAR214G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000283 1.1e-08 63.9 97 33.0
Dinv04707 Davidia involucrata HOM05D000003 ORTHO05D000283 1.5e-08 63.5 89 33.7
Duzib268G1368 Durio zibethinus HOM05D000003 ORTHO05D000283 1.5e-08 63.5 94 30.9
Sabra19G0073100 Salix brachista HOM05D000003 ORTHO05D000006 1.5e-08 63.5 95 35.8
BcaB03g16681 Brassica carinata HOM05D000003 ORTHO05D000283 1.9e-08 63.2 48 54.2
Sabra16G0051100 Salix brachista HOM05D000003 ORTHO05D000006 1.9e-08 63.2 99 33.3
PGR044G2585 Punica granatum HOM05D000003 ORTHO05D000283 2.5e-08 62.8 67 40.3
Atru.chr9.194 Acer truncatum HOM05D000003 ORTHO05D000283 3.3e-08 62.4 98 28.6
PGSC0003DMG400005322 Solanum tuberosum HOM05D000003 ORTHO05D000283 3.3e-08 62.4 96 31.2
ECA233G4389 Erigeron canadensis HOM05D000003 ORTHO05D000283 4.3e-08 62.0 97 33.0
ECA234G2714 Erigeron canadensis HOM05D000003 ORTHO05D000283 4.3e-08 62.0 94 28.7
Sabra17G0039100 Salix brachista HOM05D000003 ORTHO05D000283 4.3e-08 62.0 93 36.6
Rhsim09G0057800 Rhododendron simsii HOM05D000003 ORTHO05D000283 5.6e-08 61.6 55 49.1
THA.LOC104798663 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 5.6e-08 61.6 48 52.1
ECA240G0545 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.3e-08 61.2 91 31.9
Sabra10G0134200 Salix brachista HOM05D000003 ORTHO05D000283 7.3e-08 61.2 65 43.1
BcaC03g15783 Brassica carinata HOM05D000003 ORTHO05D000283 9.5e-08 60.8 92 30.4
Rhsim01G0087700 Rhododendron simsii HOM05D000003 ORTHO05D000283 9.5e-08 60.8 97 35.1
AL4G28120 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.2e-07 60.5 98 32.7
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.2e-07 60.5 58 43.1
BcaB04g19079 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-07 60.5 48 54.2
Dinv18424 Davidia involucrata HOM05D014648 ORTHO05D000283 1.2e-07 60.5 92 33.7
Nitab4.5_0003715g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.2e-07 60.5 64 42.2
Sabra11G0018000 Salix brachista HOM05D000022 ORTHO05D000283 1.2e-07 60.5 60 41.7
Sabra11G0113300 Salix brachista HOM05D000003 ORTHO05D000007 1.2e-07 60.5 65 41.5
PGSC0003DMG400031219 Solanum tuberosum HOM05D000003 ORTHO05D000283 1.2e-07 60.5 66 40.9
Atru.chr3.1845 Acer truncatum HOM05D000003 ORTHO05D000283 1.6e-07 60.1 59 39.0
Aqoxy3G01842 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 1.6e-07 60.1 94 34.0
Sabra02G0000200 Salix brachista HOM05D000003 ORTHO05D000283 1.6e-07 60.1 78 33.3
Sabra02G0200000 Salix brachista HOM05D000003 ORTHO05D000006 1.6e-07 60.1 60 41.7
AL1G41870 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.1e-07 59.7 71 38.0
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-07 59.7 48 54.2
ECA240G1960 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.1e-07 59.7 88 31.8
Dinv17947 Davidia involucrata HOM05D000003 ORTHO05D000006 2.8e-07 59.3 83 31.3
Nitab4.5_0006217g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.8e-07 59.3 144 27.8
Sabra01G0063500 Salix brachista HOM05D000003 ORTHO05D000283 2.8e-07 59.3 67 40.3
Aqoxy2G01647 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 3.6e-07 58.9 94 34.0
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-07 58.9 47 51.1
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 3.6e-07 58.9 48 56.2
Carub.0002s0853 Capsella rubella HOM05D000003 ORTHO05D000283 3.6e-07 58.9 96 29.2
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 3.6e-07 58.9 92 32.6
ECA232G3580 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.6e-07 58.9 91 28.6
Sabra18G0006200 Salix brachista HOM05D000003 ORTHO05D000007 3.6e-07 58.9 75 34.7
Sabra18G0008200 Salix brachista HOM05D000003 ORTHO05D000007 3.6e-07 58.9 75 34.7
Sabra18G0037800 Salix brachista HOM05D003631 ORTHO05D000007 3.6e-07 58.9 63 39.7
THA.LOC104820083 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.6e-07 58.9 54 48.1
Actinidia11782 Actinidia chinensis HOM05D000003 ORTHO05D000283 4.7e-07 58.5 104 30.8
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 4.7e-07 58.5 48 45.8
C05p39080 Brassica napus HOM05D000003 ORTHO05D000283 4.7e-07 58.5 64 37.5
THA.LOC109116418 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 4.7e-07 58.5 48 50.0
BcaC07g39463 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-07 58.2 99 34.3
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-07 58.2 48 47.9
BolC1t01970H Brassica oleracea HOM05D000003 ORTHO05D000283 6.2e-07 58.2 98 29.6
ECA233G4990 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.2e-07 58.2 98 32.7
ECA248G0578 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.2e-07 58.2 91 27.5
HanXRQChr01g0016641 Helianthus annuus HOM05D000003 ORTHO05D000004 6.2e-07 58.2 95 28.4
THA.LOC104799701 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 6.2e-07 58.2 97 38.1
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 8.1e-07 57.8 48 47.9
THA.LOC109116242 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 8.1e-07 57.8 55 43.6
vmacro03128 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 8.1e-07 57.8 100 34.0
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.4 48 47.9
BcaC03g18113 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.4 48 47.9
BcaNung03095 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.4 48 47.9
ECA246G1600 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 94 35.1
Sabra09G0009900 Salix brachista HOM05D000003 ORTHO05D000283 1.1e-06 57.4 95 33.7
BcaB03g15077 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-06 57.0 49 49.0
BcaB05g25304 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-06 57.0 48 50.0
BraA06t26517Z Brassica rapa HOM05D000003 ORTHO05D000283 1.4e-06 57.0 48 50.0
ECA233G4110 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 57.0 104 33.7
ECA236G2980 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 57.0 92 28.3
Oeu043032.1 Olea europaea HOM05D000003 ORTHO05D000283 1.4e-06 57.0 71 39.4
Sabra07G0060000 Salix brachista HOM05D000003 ORTHO05D000007 1.4e-06 57.0 64 39.1
Sabra11G0062400 Salix brachista HOM05D000003 ORTHO05D000283 1.4e-06 57.0 75 33.3
Sabra11G0094500 Salix brachista HOM05D000003 ORTHO05D000283 1.4e-06 57.0 54 40.7
Sabra11G0094800 Salix brachista HOM05D000054 ORTHO05D000283 1.4e-06 57.0 54 40.7
Aqoxy3G03001 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 1.8e-06 56.6 91 33.0
BcaB02g10118 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-06 56.6 62 38.7
BcaB03g13757 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-06 56.6 71 35.2
BcaB05g24914 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-06 56.6 48 52.1
BcaB07g30964 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-06 56.6 47 48.9
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 1.8e-06 56.6 48 45.8
PSO063G7133 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.6 65 40.0
QL04p018974 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-06 56.6 60 41.7
AL7G34100 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 2.4e-06 56.2 93 33.3
BcaC02g10364 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 56.2 45 53.3
BcaC02g12383 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 56.2 45 53.3
BcaC05g25052 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 56.2 98 31.6
BolC2t09122H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-06 56.2 64 37.5
BolC3t19854H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-06 56.2 62 37.1
BolC5t31190H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-06 56.2 71 31.0
BraA06t23500Z Brassica rapa HOM05D000003 ORTHO05D000283 2.4e-06 56.2 58 41.4
BraA10t42560Z Brassica rapa HOM05D000003 ORTHO05D000283 2.4e-06 56.2 48 47.9
Rhsim06G0237400 Rhododendron simsii HOM05D000003 ORTHO05D000283 2.4e-06 56.2 94 29.8
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 2.4e-06 56.2 121 26.4
Atru.chr7.449 Acer truncatum HOM05D000004 ORTHO05D000563 3.1e-06 55.8 59 37.3
Aa31LG3G3470 Aethionema arabicum HOM05D000003 ORTHO05D000283 3.1e-06 55.8 60 38.3
Aqoxy2G01587 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.1e-06 55.8 94 34.0
Aqoxy5G03183 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 3.1e-06 55.8 78 33.3
BcaB04g17254 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-06 55.8 54 42.6
BcaB07g32023 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-06 55.8 47 48.9
AUR62033088 Chenopodium quinoa HOM05D000003 ORTHO05D000283 3.1e-06 55.8 57 43.9
ECA238G4393 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.1e-06 55.8 92 29.3
HanXRQChr03g0065081 Helianthus annuus HOM05D000003 ORTHO05D000283 3.1e-06 55.8 99 28.3
THA.LOC104804698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.1e-06 55.8 82 32.9
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 4.0e-06 55.5 49 51.0
BolC9t58165H Brassica oleracea HOM05D000003 ORTHO05D000283 4.0e-06 55.5 75 42.7
Duzib235G0456 Durio zibethinus HOM05D000003 ORTHO05D000283 4.0e-06 55.5 64 35.9
ECA232G1739 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.0e-06 55.5 86 27.9
ECA233G5384 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.0e-06 55.5 142 23.2
HanXRQChr09g0251081 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-06 55.5 71 38.0
Oeu025341.1 Olea europaea HOM05D000003 ORTHO05D000283 4.0e-06 55.5 125 28.8
Sabra03G0102700 Salix brachista HOM05D000003 ORTHO05D000283 4.0e-06 55.5 60 40.0
THA.LOC104814739 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 4.0e-06 55.5 94 34.0
vmacro13150 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 4.0e-06 55.5 91 29.7
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 5.2e-06 55.1 48 50.0
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 5.2e-06 55.1 48 45.8
BraA01t01398Z Brassica rapa HOM05D000003 ORTHO05D000283 5.2e-06 55.1 68 33.8
CSS0008770 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.2e-06 55.1 97 29.9
ECA232G0352 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.2e-06 55.1 61 36.1
ECA233G0347 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.2e-06 55.1 57 45.6
Nitab4.5_0001175g0190 Nicotiana tabacum HOM05D000003 ORTHO05D000283 5.2e-06 55.1 152 28.3
Sabra09G0000100 Salix brachista HOM05D000003 ORTHO05D000283 5.2e-06 55.1 67 40.3
AL3G43240 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 6.8e-06 54.7 64 37.5
BolC6t37177H Brassica oleracea HOM05D000003 ORTHO05D000283 6.8e-06 54.7 64 32.8
BraA04t17757Z Brassica rapa HOM05D000003 ORTHO05D000283 6.8e-06 54.7 86 31.4
Carub.0001s3394 Capsella rubella HOM05D000003 ORTHO05D000283 6.8e-06 54.7 97 29.9
ECA232G2729 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.8e-06 54.7 94 26.6
Nitab4.5_0000234g0180 Nicotiana tabacum HOM05D000003 ORTHO05D000283 6.8e-06 54.7 97 32.0
Sabra16G0321900 Salix brachista HOM05D000003 ORTHO05D000007 6.8e-06 54.7 79 30.4
THA.LOC104825769 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 6.8e-06 54.7 56 41.1
Atru.chr7.161 Acer truncatum HOM05D000003 ORTHO05D000283 8.9e-06 54.3 59 35.6
Aqoxy5G02786 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 8.9e-06 54.3 95 31.6
A03p35460 Brassica napus HOM05D000003 ORTHO05D000283 8.9e-06 54.3 96 32.3
BraA03t12723Z Brassica rapa HOM05D000003 ORTHO05D000283 8.9e-06 54.3 96 32.3
BraA10t42734Z Brassica rapa HOM05D000003 ORTHO05D000283 8.9e-06 54.3 49 46.9
Carub.0003s3092 Capsella rubella HOM05D000003 ORTHO05D000283 8.9e-06 54.3 43 53.5
AUR62006511 Chenopodium quinoa HOM05D000003 ORTHO05D000283 8.9e-06 54.3 43 48.8
ECA248G2742 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.9e-06 54.3 99 28.3
Lj6P486T6 Lonicera japonica HOM05D000003 ORTHO05D000283 8.9e-06 54.3 82 31.7
Nitab4.5_0001488g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 8.9e-06 54.3 147 26.5
PSO017G3756 Papaver somniferum HOM05D000003 ORTHO05D000283 8.9e-06 54.3 54 40.7
Sabra04G0097700 Salix brachista HOM05D000003 ORTHO05D000283 8.9e-06 54.3 64 37.5


User provided reference genes

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