Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 1.9e-71 272.7 168 100.0
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 3.2e-47 192.2 133 92.5
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 2.2e-27 126.3 131 59.5
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 2.9e-24 115.9 113 61.9
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 6.5e-24 114.8 115 67.8
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 8.5e-24 114.4 115 67.0
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 2.5e-23 112.8 112 61.6
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 7.2e-23 111.3 111 64.9
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 2.1e-22 109.8 111 63.1
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 2.3e-21 106.3 113 51.3
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 2.3e-21 106.3 112 61.6
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 2.3e-21 106.3 133 58.6
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 4.0e-21 105.5 114 64.0
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 1.2e-20 104.0 133 56.4
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 1.4e-18 97.1 112 58.0
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 1.8e-18 96.7 132 53.0
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 2.3e-16 89.7 103 56.3
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 3.8e-16 89.0 113 52.2
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 5.0e-16 88.6 133 54.1
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 3.6e-14 82.4 85 65.9
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 3.6e-14 82.4 85 65.9
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 6.1e-14 81.6 145 53.1
Migut.N03053 Erythranthe guttata HOM05D007607 ORTHO05D009603 8.0e-14 81.3 106 60.4
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 8.0e-14 81.3 109 54.1
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.0e-13 80.9 85 64.7
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 1.0e-13 80.9 107 47.7
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 2.3e-13 79.7 117 53.0
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 6.8e-13 78.2 94 60.6
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 1.2e-12 77.4 104 55.8
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 1.2e-12 77.4 101 50.5
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 1.2e-12 77.4 102 57.8
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 2.0e-12 76.6 115 56.5
SalBow6G6796 Salvia bowleyana HOM05D007607 ORTHO05D009603 2.0e-12 76.6 100 56.0
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 2.6e-12 76.3 101 45.5
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 3.4e-12 75.9 138 46.4
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 3.4e-12 75.9 106 53.8
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 4.4e-12 75.5 112 50.0
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 5.7e-12 75.1 91 53.8
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 5.7e-12 75.1 93 49.5
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 7.5e-12 74.7 94 60.6
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 1.3e-11 73.9 106 58.5
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 2.2e-11 73.2 94 59.6
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 2.9e-11 72.8 108 60.2
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 3.7e-11 72.4 93 50.5
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 6.4e-11 71.6 83 62.7
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.1e-10 70.9 92 59.8
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 1.4e-10 70.5 93 60.2
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 2.4e-10 69.7 80 63.8
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 3.2e-10 69.3 90 64.4
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 3.2e-10 69.3 107 52.3
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 4.1e-10 68.9 118 47.5
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 4.1e-10 68.9 80 63.8
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 5.4e-10 68.6 80 63.8
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 7.0e-10 68.2 152 45.4
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 9.2e-10 67.8 77 61.0
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 9.2e-10 67.8 102 52.0
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 9.2e-10 67.8 102 52.0
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 1.6e-09 67.0 110 50.0
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 1.6e-09 67.0 78 53.8
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 2.0e-09 66.6 77 61.0
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 2.7e-09 66.2 152 44.7
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 3.5e-09 65.9 96 41.7
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 4.6e-09 65.5 80 63.8
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 4.6e-09 65.5 96 51.0
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 7.8e-09 64.7 80 65.0
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 7.8e-09 64.7 80 65.0
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 7.8e-09 64.7 77 66.2
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 7.8e-09 64.7 96 53.1
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 7.8e-09 64.7 108 51.9
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 1.3e-08 63.9 149 43.0
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 1.3e-08 63.9 102 51.0
Phvul.003G059800 Phaseolus vulgaris HOM05D007607 ORTHO05D009603 1.3e-08 63.9 115 48.7
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 1.3e-08 63.9 157 43.9
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 1.7e-08 63.5 84 63.1
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 3.0e-08 62.8 117 53.0
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 3.9e-08 62.4 68 54.4
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 3.9e-08 62.4 77 59.7
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 5.0e-08 62.0 112 48.2
unitig_22.g5705 Utricularia gibba HOM05D007607 ORTHO05D009603 8.6e-08 61.2 110 47.3
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 1.1e-07 60.8 75 66.7
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 1.1e-07 60.8 152 42.1
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 1.1e-07 60.8 80 62.5
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 1.5e-07 60.5 80 60.0
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 1.9e-07 60.1 75 64.0
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 1.9e-07 60.1 95 56.8
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 3.3e-07 59.3 37 78.4
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 5.6e-07 58.5 109 49.5
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 5.6e-07 58.5 75 61.3
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 5.6e-07 58.5 114 47.4
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 5.6e-07 58.5 101 49.5
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 9.5e-07 57.8 75 60.0
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 9.5e-07 57.8 69 60.9
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 2.1e-06 56.6 75 58.7
TPR.G23536 Trifolium pratense HOM05D007607 ORTHO05D009603 3.6e-06 55.8 80 62.5
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 4.7e-06 55.5 80 41.2


User provided reference genes

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