Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 4.2e-156 554.7 288 100.0
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.0e-154 550.1 289 99.7
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 9.1e-42 174.9 357 42.6
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 2.8e-38 163.3 361 40.7
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 6.6e-24 115.5 326 36.8
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 4.3e-23 112.8 338 36.4
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 7.3e-23 112.1 330 34.2
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 4.7e-22 109.4 343 35.6
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 1.8e-21 107.5 344 36.0
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 6.8e-21 105.5 339 33.3
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 2.4e-18 97.1 306 33.0
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 7.0e-18 95.5 295 32.9
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 2.7e-17 93.6 326 34.0
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 1.7e-16 90.9 350 32.9
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 3.0e-16 90.1 338 31.4
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 5.0e-16 89.4 315 33.3
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 1.2e-14 84.7 323 30.7
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.6e-14 84.3 291 31.6
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.6e-14 84.3 323 30.7
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 3.1e-13 80.1 284 31.3
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 1.7e-11 74.3 327 31.5
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 2.2e-11 73.9 305 26.9
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 2.2e-11 73.9 244 32.0
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 2.9e-11 73.6 193 37.8
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 8.3e-11 72.0 234 34.2
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 1.1e-10 71.6 214 33.6
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 1.9e-10 70.9 299 32.1
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 2.4e-10 70.5 143 39.2
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 4.1e-10 69.7 298 30.2
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 4.1e-10 69.7 327 31.8
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 7.1e-10 68.9 174 36.2
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 7.1e-10 68.9 329 32.5
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 1.2e-09 68.2 215 34.9
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 1.6e-09 67.8 143 37.1
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 2.7e-09 67.0 192 37.0
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 6.0e-09 65.9 127 41.7
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 1.0e-08 65.1 311 31.2
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 3.0e-08 63.5 201 31.8
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 1.9e-07 60.8 354 28.8
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 5.6e-07 59.3 288 29.9
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 5.6e-07 59.3 95 45.3
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 9.5e-07 58.5 165 35.2
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.2e-06 58.2 92 43.5
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 2.1e-06 57.4 297 30.0


User provided reference genes

Program Settings