Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.4e-78 296.2 146 100.0
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 9.6e-56 220.3 138 81.9
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.3e-38 161.4 91 91.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.2e-28 129.4 147 56.5
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.2e-28 129.4 147 56.5
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 4.7e-26 121.7 94 73.4
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 5.1e-25 118.2 94 71.3
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 6.7e-25 117.9 94 71.3
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 8.8e-25 117.5 94 70.2
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.1e-24 117.1 140 52.9
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.5e-24 116.7 94 69.1
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.6e-24 115.9 94 70.2
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.6e-24 115.9 94 70.2
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 2.6e-24 115.9 94 69.1
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 3.3e-24 115.5 94 70.2
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 3.3e-24 115.5 94 70.2
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 5.7e-24 114.8 94 68.1
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 5.7e-24 114.8 94 69.1
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 9.7e-24 114.0 137 52.6
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 1.3e-23 113.6 94 67.0
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.3e-23 113.6 94 67.0
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.3e-23 113.6 94 67.0
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.7e-23 113.2 105 61.0
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.7e-23 113.2 94 68.1
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 2.2e-23 112.8 92 68.5
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 2.2e-23 112.8 94 67.0
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 2.8e-23 112.5 92 68.5
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 3.7e-23 112.1 118 58.5
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 3.7e-23 112.1 94 68.1
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 3.7e-23 112.1 100 63.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 8.2e-23 110.9 94 66.0
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 8.2e-23 110.9 94 66.0
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.1e-22 110.5 91 65.9
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 1.4e-22 110.2 94 67.0
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 1.8e-22 109.8 94 64.9
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 2.4e-22 109.4 140 49.3
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.1e-22 109.0 94 64.9
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 3.1e-22 109.0 94 66.0
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 5.3e-22 108.2 94 67.0
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.3e-22 108.2 94 67.0
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 7.0e-22 107.8 107 57.9
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 7.0e-22 107.8 120 55.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 9.1e-22 107.5 94 62.8
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 9.1e-22 107.5 94 62.8
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.2e-21 107.1 94 62.8
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 1.2e-21 107.1 94 64.9
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 1.5e-21 106.7 94 62.8
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 1.5e-21 106.7 94 64.9
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.5e-21 106.7 94 64.9
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.0e-21 106.3 95 64.2
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 2.6e-21 105.9 94 64.9
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 2.6e-21 105.9 94 64.9
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 3.4e-21 105.5 91 67.0
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.4e-21 105.5 94 61.7
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 4.5e-21 105.1 94 63.8
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 5.9e-21 104.8 94 63.8
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 7.7e-21 104.4 94 60.6
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 7.7e-21 104.4 94 60.6
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.7e-21 104.4 140 49.3
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.7e-21 104.4 140 49.3
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 1.0e-20 104.0 94 60.6
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.0e-20 104.0 94 60.6
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.0e-20 104.0 94 60.6
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.0e-20 104.0 94 62.8
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.3e-20 103.6 92 65.2
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 2.2e-20 102.8 97 61.9
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.2e-20 102.8 94 61.7
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.2e-20 102.8 94 61.7
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.2e-20 102.8 97 61.9
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.2e-20 102.8 97 61.9
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 2.9e-20 102.4 107 54.2
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.8e-20 102.1 93 64.5
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 3.8e-20 102.1 94 58.5
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 3.8e-20 102.1 119 51.3
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 5.0e-20 101.7 94 61.7
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 5.0e-20 101.7 94 61.7
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 5.0e-20 101.7 94 61.7
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 5.0e-20 101.7 94 61.7
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 6.5e-20 101.3 91 64.8
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 8.5e-20 100.9 94 57.4
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 8.5e-20 100.9 139 48.9
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.1e-19 100.5 94 60.6
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 4.2e-19 98.6 119 50.4
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 4.2e-19 98.6 94 60.6
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 4.2e-19 98.6 94 60.6
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 4.2e-19 98.6 94 60.6
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 9.4e-19 97.4 103 54.4
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 2.7e-18 95.9 96 58.3
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 2.7e-18 95.9 91 61.5
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.7e-18 95.9 93 58.1
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 3.6e-18 95.5 119 46.2
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 8.0e-18 94.4 107 52.3
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 8.2e-15 84.3 106 46.2
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.1e-14 82.0 52 84.6
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 7.0e-14 81.3 80 61.2
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 7.0e-14 81.3 80 58.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.6e-13 80.1 80 57.5
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 4.5e-13 78.6 80 56.2
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 5.9e-13 78.2 99 49.5
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.3e-12 77.0 49 79.6
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 6.5e-12 74.7 78 53.8
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 8.5e-12 74.3 78 53.8
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.1e-11 73.9 80 51.2
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.5e-11 73.6 49 77.6
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 2.5e-11 72.8 122 38.5
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.2e-11 72.4 46 78.3
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.2e-11 72.4 119 37.8
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 2.3e-09 66.2 49 67.3
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 5.2e-09 65.1 79 46.8
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 7.5e-08 61.2 32 96.9
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 2.2e-07 59.7 70 51.4
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 7.0e-06 54.7 85 40.0


User provided reference genes

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