Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 8.6e-44 179.9 87 100.0
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.4e-40 167.9 84 94.0
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.1e-38 162.9 83 95.2
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.6e-37 159.1 83 92.8
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 3.9e-36 154.5 83 89.2
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 2.5e-35 151.8 83 88.0
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 1.8e-33 145.6 85 83.5
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 3.1e-33 144.8 83 83.1
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 6.8e-33 143.7 83 83.1
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 8.9e-33 143.3 81 81.5
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 1.5e-32 142.5 81 82.7
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 2.0e-32 142.1 81 84.0
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 9.8e-32 139.8 83 79.5
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 1.3e-31 139.4 83 78.3
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 2.9e-31 138.3 83 78.3
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 2.9e-31 138.3 83 80.7
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 3.7e-31 137.9 85 78.8
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 3.7e-31 137.9 85 77.6
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 4.9e-31 137.5 83 78.3
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 8.3e-31 136.7 81 79.0
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 1.1e-30 136.3 82 74.4
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 1.4e-30 136.0 81 79.0
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.4e-30 136.0 81 79.0
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 1.4e-30 136.0 83 77.1
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.9e-30 135.6 81 76.5
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 1.9e-30 135.6 81 77.8
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 2.4e-30 135.2 81 79.0
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 2.4e-30 135.2 81 77.8
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 2.4e-30 135.2 81 79.0
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 3.2e-30 134.8 81 77.8
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 4.1e-30 134.4 85 74.1
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 4.1e-30 134.4 81 77.8
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 5.4e-30 134.0 81 80.2
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 5.4e-30 134.0 81 77.8
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 5.4e-30 134.0 83 74.7
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 7.0e-30 133.7 81 77.8
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 9.2e-30 133.3 81 75.3
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 1.2e-29 132.9 81 76.5
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 1.2e-29 132.9 80 78.8
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 1.6e-29 132.5 81 77.8
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 2.1e-29 132.1 81 75.3
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 2.7e-29 131.7 85 74.1
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 2.7e-29 131.7 85 75.3
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 3.5e-29 131.3 83 74.7
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.5e-29 131.3 81 76.5
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 3.5e-29 131.3 74 82.4
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 4.6e-29 131.0 81 76.5
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 77.8
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 75.3
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 75.3
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 6.0e-29 130.6 85 75.3
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 6.0e-29 130.6 81 75.3
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 7.8e-29 130.2 81 77.8
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 7.8e-29 130.2 83 73.5
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 7.8e-29 130.2 81 74.1
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 7.8e-29 130.2 81 75.3
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 1.0e-28 129.8 85 72.9
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 1.3e-28 129.4 81 74.1
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 1.3e-28 129.4 81 75.3
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 1.3e-28 129.4 72 83.3
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 2.3e-28 128.6 81 76.5
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 2.3e-28 128.6 126 57.1
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 2.3e-28 128.6 80 76.2
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.0e-28 128.3 81 74.1
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 3.0e-28 128.3 74 81.1
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 3.0e-28 128.3 83 72.3
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 3.0e-28 128.3 85 71.8
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 3.9e-28 127.9 81 76.5
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.9e-28 127.9 76 78.9
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 3.9e-28 127.9 81 74.1
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 5.1e-28 127.5 83 72.3
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 5.1e-28 127.5 73 82.2
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 5.1e-28 127.5 73 82.2
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 5.1e-28 127.5 73 82.2
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 5.1e-28 127.5 73 82.2
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 5.1e-28 127.5 81 74.1
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.1e-27 126.3 74 79.7
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 1.1e-27 126.3 97 66.0
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 1.1e-27 126.3 83 71.1
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 1.5e-27 125.9 81 72.8
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 1.5e-27 125.9 81 72.8
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 1.5e-27 125.9 81 72.8
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 1.5e-27 125.9 80 75.0
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.9e-27 125.6 72 81.9
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 1.9e-27 125.6 81 72.8
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.5e-27 125.2 75 76.0
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 2.5e-27 125.2 81 72.8
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 2.5e-27 125.2 81 72.8
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.5e-27 125.2 81 72.8
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.3e-27 124.8 81 72.8
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 3.3e-27 124.8 70 84.3
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 3.3e-27 124.8 83 72.3
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 3.3e-27 124.8 84 70.2
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 3.3e-27 124.8 81 72.8
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 7.3e-27 123.6 81 74.1
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 7.3e-27 123.6 82 73.2
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 9.5e-27 123.2 72 80.6
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 1.2e-26 122.9 83 68.7
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.6e-26 122.5 74 78.4
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 1.6e-26 122.5 73 79.5
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 2.1e-26 122.1 72 79.2
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.8e-26 121.7 81 72.8
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 2.8e-26 121.7 85 71.8
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 3.6e-26 121.3 83 68.7
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 4.7e-26 120.9 76 73.7
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 6.2e-26 120.6 81 70.4
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 8.1e-26 120.2 71 77.5
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 8.1e-26 120.2 83 67.5
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 2.3e-25 118.6 74 74.3
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 3.1e-25 118.2 71 78.9
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 3.1e-25 118.2 71 80.3
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 3.1e-25 118.2 83 67.5
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 5.2e-25 117.5 71 77.5
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 8.9e-25 116.7 81 69.1
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 1.2e-24 116.3 70 80.0
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.5e-24 115.9 70 78.6
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 1.5e-24 115.9 81 66.7
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 3.4e-24 114.8 79 69.6
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 3.7e-23 111.3 61 86.9
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 8.3e-23 110.2 70 77.1
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.1e-22 109.8 65 80.0
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.1e-22 109.8 64 79.7
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.0e-20 103.2 58 82.8
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 1.3e-20 102.8 81 63.0
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 2.3e-20 102.1 81 66.7
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 3.9e-20 101.3 70 68.6
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 1.5e-19 99.4 81 60.5
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 2.5e-19 98.6 83 60.2
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.6e-18 94.7 76 67.1
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 3.6e-18 94.7 58 75.9
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.7e-18 94.4 81 60.5
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 1.1e-17 93.2 56 78.6
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 5.2e-17 90.9 73 58.9
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 5.2e-17 90.9 73 58.9
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 5.2e-17 90.9 73 64.4
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 7.6e-16 87.0 70 58.6
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 1.1e-14 83.2 69 56.5
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 3.5e-13 78.2 49 73.5
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.0e-12 76.6 45 77.8
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 1.3e-12 76.3 72 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.3e-12 75.5 58 62.1
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 3.0e-12 75.1 48 72.9
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 4.3e-11 71.2 45 71.1
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 7.3e-11 70.5 47 72.3
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 7.3e-11 70.5 77 46.8
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 1.3e-10 69.7 75 48.0
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.4e-09 65.5 46 67.4
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 9.0e-09 63.5 37 81.1
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 3.8e-07 58.2 69 37.7


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