Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042087 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D110324 4.2e-86 321.2 152 100.0
CSS0026477 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D003027 3.7e-66 255.0 122 98.4
Dinv26458 Davidia involucrata HOM05D001026 ORTHO05D003027 1.1e-25 120.6 147 55.1
Hma1.2p1_0314F.1_g121900 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 8.8e-20 100.9 105 52.4
vmacro22289 Vaccinium macrocarpon HOM05D001026 ORTHO05D003027 2.6e-19 99.4 83 66.3
TAR625G0921 Trochodendron aralioides HOM05D001026 ORTHO05D003027 1.3e-18 97.1 98 55.1
QL11p009474 Quercus lobata HOM05D001026 ORTHO05D003027 2.2e-18 96.3 74 64.9
Rhsim03G0268200 Rhododendron simsii HOM05D001026 ORTHO05D003027 2.2e-18 96.3 137 44.5
Ciclev10007489m.g Citrus clementina HOM05D001026 ORTHO05D003027 2.8e-18 95.9 107 47.7
Sabra18G0112200 Salix brachista HOM05D001026 ORTHO05D003027 1.1e-17 94.0 74 58.1
MBI16_g18205_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D003027 1.4e-17 93.6 71 73.2
Nn8g41047 Nelumbo nucifera HOM05D001026 ORTHO05D003027 3.1e-17 92.4 93 58.1
RcHm_v2.0_Chr4g0398221 Rosa chinensis HOM05D001026 ORTHO05D003027 5.4e-17 91.7 85 56.5
Potri.018G132500 Populus trichocarpa HOM05D001026 ORTHO05D003027 7.0e-17 91.3 90 55.6
FAN22G1176 Fragaria x ananassa HOM05D001026 ORTHO05D003027 1.6e-16 90.1 67 67.2
Duzib168G0491 Durio zibethinus HOM05D001026 ORTHO05D003027 2.7e-16 89.4 79 55.7
Oeu000971.1 Olea europaea HOM05D001026 ORTHO05D003027 2.7e-16 89.4 81 60.5
CiPaw.15G154500 Carya illinoinensis HOM05D001026 ORTHO05D003027 4.5e-16 88.6 117 44.4
Gorai.012G008800 Gossypium raimondii HOM05D001026 ORTHO05D003027 4.5e-16 88.6 110 44.5
Prupe.1G067700 Prunus persica HOM05D001026 ORTHO05D003027 4.5e-16 88.6 95 51.6
GSVIVG01035168001 Vitis vinifera HOM05D001026 ORTHO05D003027 4.5e-16 88.6 89 55.1
MD13G1236000 Malus domestica HOM05D001026 ORTHO05D003027 7.8e-16 87.8 73 61.6
Sc14g0001410 Simmondsia chinensis HOM05D001026 ORTHO05D003027 7.8e-16 87.8 75 56.0
Cpa.g.sc115.45 Carica papaya HOM05D001026 ORTHO05D003027 1.0e-15 87.4 78 60.3
FAN07G0050 Fragaria x ananassa HOM05D001026 ORTHO05D003027 1.3e-15 87.0 73 60.3
MD16G1240700 Malus domestica HOM05D001026 ORTHO05D003027 1.3e-15 87.0 142 41.5
MD16G1240800 Malus domestica HOM05D001026 ORTHO05D003027 1.3e-15 87.0 142 41.5
Aqoxy7G02694 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 2.3e-15 86.3 121 44.6
Potri.006G070800 Populus trichocarpa HOM05D001026 ORTHO05D003027 3.8e-15 85.5 74 56.8
Sp4g22240 Schrenkiella parvula HOM05D001026 ORTHO05D003027 6.6e-15 84.7 58 65.5
FvH4_4g06440 Fragaria vesca HOM05D001026 ORTHO05D003027 8.6e-15 84.3 73 58.9
PGR044G2410 Punica granatum HOM05D001026 ORTHO05D003027 1.5e-14 83.6 72 59.7
SGA_v2.0_scaffold31G12733 Striga asiatica HOM05D001026 ORTHO05D003027 1.5e-14 83.6 71 62.0
A05p06490 Brassica napus HOM05D001026 ORTHO05D003027 1.9e-14 83.2 58 65.5
BraA05t19617Z Brassica rapa HOM05D001026 ORTHO05D003027 1.9e-14 83.2 58 65.5
CAN.G33.2 Capsicum annuum HOM05D001026 ORTHO05D003027 1.9e-14 83.2 87 54.0
ClCG06G013990 Citrullus lanatus HOM05D001026 ORTHO05D003027 1.9e-14 83.2 107 42.1
MELO3C017391.2 Cucumis melo HOM05D001026 ORTHO05D003027 1.9e-14 83.2 67 59.7
FAN12G0904 Fragaria x ananassa HOM05D001026 ORTHO05D003027 1.9e-14 83.2 69 60.9
Sabra06G0052700 Salix brachista HOM05D001026 ORTHO05D003027 2.5e-14 82.8 77 53.2
BcaB02g09070 Brassica carinata HOM05D001026 ORTHO05D003027 3.3e-14 82.4 58 65.5
AL4G37510 Arabidopsis lyrata HOM05D001026 ORTHO05D003027 4.3e-14 82.0 81 48.1
MSTRG.5953 Avicennia marina HOM05D001026 ORTHO05D003027 4.3e-14 82.0 114 41.2
Cfa020723 Carpinus fangiana HOM05D001026 ORTHO05D003027 4.3e-14 82.0 69 63.8
Peaxi162Scf00889g00224 Petunia axillaris HOM05D001026 ORTHO05D003027 4.3e-14 82.0 73 61.6
Aa31LG5G19690 Aethionema arabicum HOM05D001026 ORTHO05D003027 5.6e-14 81.6 96 49.0
BolC4t22374H Brassica oleracea HOM05D001026 ORTHO05D003027 5.6e-14 81.6 58 63.8
Cc10_g11550 Coffea canephora HOM05D001026 ORTHO05D003027 5.6e-14 81.6 85 55.3
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 5.6e-14 81.6 73 56.2
HanXRQChr05g0136381 Helianthus annuus HOM05D001026 ORTHO05D003027 5.6e-14 81.6 73 57.5
VMungo0251G0311 Vigna mungo HOM05D001026 ORTHO05D003027 5.6e-14 81.6 64 64.1
CARHR134850 Cardamine hirsuta HOM05D001026 ORTHO05D003027 7.3e-14 81.3 65 58.5
Gohir.A05G408400 Gossypium hirsutum HOM05D001026 ORTHO05D003027 7.3e-14 81.3 79 51.9
THA.LOC104826981 Tarenaya hassleriana HOM05D001026 ORTHO05D003027 7.3e-14 81.3 80 53.8
Thhalv10016275m.g Eutrema salsugineum HOM05D001026 ORTHO05D003027 9.5e-14 80.9 58 60.3
C04p07570 Brassica napus HOM05D001026 ORTHO05D003027 1.2e-13 80.5 70 60.0
Migut.J00824 Erythranthe guttata HOM05D001026 ORTHO05D003027 1.6e-13 80.1 66 66.7
Manes.06G054000 Manihot esculenta HOM05D001026 ORTHO05D003027 3.6e-13 79.0 69 58.0
SalBow6G3178 Salvia bowleyana HOM05D001026 ORTHO05D003027 3.6e-13 79.0 96 50.0
Hund09047 Selenicereus undatus HOM05D001026 ORTHO05D003027 3.6e-13 79.0 57 61.4
Carub.0004s2206 Capsella rubella HOM05D001026 ORTHO05D003027 4.7e-13 78.6 58 62.1
CsaV3_1G032200 Cucumis sativus L. HOM05D001026 ORTHO05D003027 6.1e-13 78.2 72 55.6
AT2G39930 Arabidopsis thaliana HOM05D001026 ORTHO05D003027 8.0e-13 77.8 64 54.7
Glyma.08G028400 Glycine max HOM05D001026 ORTHO05D003027 8.0e-13 77.8 79 53.2
TWI32G1029 Tripterygium wilfordii HOM05D001026 ORTHO05D003027 8.0e-13 77.8 79 55.7
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 1.4e-12 77.0 70 55.7
Lj4g0023046 Lotus japonicus HOM05D001026 ORTHO05D003027 1.4e-12 77.0 98 45.9
ECA236G4714 Erigeron canadensis HOM05D001026 ORTHO05D003027 1.8e-12 76.6 79 58.2
Ah.09g230140 Amaranthus hybridus HOM05D001026 ORTHO05D003027 2.3e-12 76.3 68 52.9
PSO170G5814 Papaver somniferum HOM05D001026 ORTHO05D003027 2.3e-12 76.3 77 53.2
arahy.Tifrunner.gnm1.ann1.TNRR0X Arachis hypogaea HOM05D001026 ORTHO05D003027 3.0e-12 75.9 76 50.0
Phvul.002G303600 Phaseolus vulgaris HOM05D001026 ORTHO05D003027 4.0e-12 75.5 64 62.5
arahy.Tifrunner.gnm1.ann1.8UPE10 Arachis hypogaea HOM05D001026 ORTHO05D003027 8.9e-12 74.3 59 59.3
PSO063G6530 Papaver somniferum HOM05D001026 ORTHO05D003027 1.2e-11 73.9 65 56.9
SEGI_02786 Sequoiadendron giganteum HOM05D001026 ORTHO05D003027 2.0e-11 73.2 45 73.3
ATR0626G365 Amborella trichopoda HOM05D001026 ORTHO05D003027 2.6e-11 72.8 68 52.9
CANSAT80G2343 Cannabis sativa HOM05D001026 ORTHO05D003027 2.6e-11 72.8 102 42.2
Solyc07g014590.4 Solanum lycopersicum HOM05D001026 ORTHO05D003027 4.4e-11 72.0 62 56.5
Sopen07g005470 Solanum pennellii HOM05D001026 ORTHO05D003027 4.4e-11 72.0 97 47.4
Lsat_1_v5_gn_8_70320 Lactuca sativa HOM05D001026 ORTHO05D003027 9.8e-11 70.9 55 67.3
Sed0017236 Sechium edule HOM05D001026 ORTHO05D003027 1.3e-10 70.5 84 47.6
EL10Ac8g18322 Beta vulgaris HOM05D001026 ORTHO05D003027 2.2e-10 69.7 57 50.9
Lalb_Chr16g0390891 Lupinus albus HOM05D001026 ORTHO05D003027 2.2e-10 69.7 53 66.0
Ca_17409_v3 Cicer arietinum L. HOM05D001026 ORTHO05D003027 2.9e-10 69.3 58 56.9
TPR.G25465 Trifolium pratense HOM05D001026 ORTHO05D003027 1.4e-09 67.0 66 53.0
Eucgr.C02189 Eucalyptus grandis HOM05D001026 ORTHO05D003027 5.4e-09 65.1 94 44.7
Actinidia29970 Actinidia chinensis HOM05D001026 ORTHO05D023293 1.2e-08 63.9 52 69.2
Psat7g021920 Pisum sativum HOM05D001026 ORTHO05D003027 2.0e-08 63.2 53 60.4
Medtr8g101490 Medicago truncatula HOM05D001026 ORTHO05D003027 1.7e-07 60.1 70 44.3
AagrBONN_evm.TU.Sc2ySwM_228.4732 Anthoceros agrestis HOM05D001026 ORTHO05D003027 3.3e-06 55.8 40 62.5
Nitab4.5_0008119g0010 Nicotiana tabacum HOM05D001026 ORTHO05D003027 7.3e-06 54.7 55 54.5
Os08g0520900 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D003027 7.3e-06 54.7 45 57.8


User provided reference genes

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