Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 6.7e-229 797.0 394 100.0
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 1.1e-178 630.2 398 79.4
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 1.4e-165 586.6 395 72.7
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 6.4e-163 577.8 396 72.5
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 9.6e-159 563.9 396 71.0
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 3.6e-158 562.0 396 70.7
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 6.9e-157 557.8 400 71.0
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 3.4e-156 555.4 400 68.5
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 1.1e-154 550.4 402 69.4
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.2e-154 548.9 397 68.0
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 4.2e-154 548.5 400 68.2
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 4.2e-154 548.5 400 68.0
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 5.4e-154 548.1 399 68.4
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.6e-153 546.6 387 69.3
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 2.1e-153 546.2 397 69.8
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 2.1e-153 546.2 397 68.0
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 3.5e-153 545.4 390 70.3
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 3.5e-153 545.4 400 67.2
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 4.6e-153 545.0 400 67.5
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 1.0e-152 543.9 402 68.4
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.3e-152 542.7 404 66.8
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 2.3e-152 542.7 400 67.5
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 3.9e-152 542.0 397 69.3
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 6.6e-152 541.2 397 67.3
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 6.6e-152 541.2 389 69.7
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 2.5e-151 539.3 382 67.8
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.5e-151 539.3 397 67.3
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 4.3e-151 538.5 397 67.3
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 7.3e-151 537.7 391 70.3
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 9.6e-151 537.3 397 68.0
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.4e-149 533.5 389 69.9
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 3.1e-149 532.3 395 65.6
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 4.0e-149 531.9 395 66.8
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 5.3e-149 531.6 391 69.3
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 1.2e-148 530.4 389 67.6
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 5.8e-148 528.1 396 64.6
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 9.9e-148 527.3 393 65.6
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 4.2e-146 521.9 391 65.5
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 4.2e-146 521.9 388 66.2
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 5.4e-146 521.5 388 66.2
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 2.1e-145 519.6 398 65.1
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 4.6e-145 518.5 390 64.6
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 6.0e-145 518.1 396 66.9
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.0e-144 517.3 399 65.2
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 1.0e-144 517.3 387 65.4
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 1.8e-144 516.5 397 65.0
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 3.0e-144 515.8 387 64.6
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 5.1e-144 515.0 367 71.9
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 6.7e-144 514.6 398 64.6
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 8.7e-144 514.2 394 64.5
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.1e-143 513.8 388 63.1
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.1e-143 513.8 388 62.4
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 1.5e-143 513.5 396 64.4
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.5e-143 513.5 402 63.9
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 3.7e-142 508.8 396 63.6
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 2.4e-141 506.1 386 64.8
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 9.0e-141 504.2 391 64.2
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 9.9e-140 500.7 388 62.6
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.3e-139 500.4 376 65.2
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.3e-139 500.4 376 65.2
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.4e-138 496.9 395 61.3
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 5.5e-138 495.0 385 63.6
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 1.2e-137 493.8 400 63.8
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.3e-136 490.3 378 64.8
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 6.7e-136 488.0 385 62.9
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 2.8e-134 482.6 397 63.2
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 4.5e-132 475.3 375 62.7
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 5.8e-132 474.9 392 60.7
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 3.8e-131 472.2 392 60.2
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 3.0e-128 462.6 414 57.7
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 1.9e-127 459.9 390 60.5
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 7.4e-127 458.0 389 59.6
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 3.7e-126 455.7 385 59.0
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 1.1e-125 454.1 344 64.8
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.5e-124 450.3 378 58.7
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 1.3e-123 447.2 391 58.6
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 2.9e-123 446.0 386 58.0
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 3.8e-123 445.7 388 59.5
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 5.0e-123 445.3 391 57.5
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 5.0e-123 445.3 386 57.8
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 6.5e-123 444.9 392 57.9
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 6.5e-123 444.9 371 60.6
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 8.5e-123 444.5 386 57.8
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 8.5e-123 444.5 386 57.8
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 9.3e-122 441.0 385 57.9
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 1.6e-121 440.3 398 57.3
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.1e-119 434.1 389 56.0
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 6.3e-118 428.3 389 54.2
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 1.4e-117 427.2 384 58.1
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 4.1e-117 425.6 313 68.7
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 5.0e-115 418.7 386 58.0
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 1.1e-114 417.5 377 56.8
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 2.3e-112 409.8 353 58.1
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 6.7e-112 408.3 343 60.9
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.7e-103 378.6 276 64.5
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.3e-102 377.5 266 73.3
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 5.3e-101 372.1 393 50.6
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 5.2e-96 355.5 239 71.1
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 6.7e-96 355.1 264 67.8
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 1.7e-94 350.5 389 45.2
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 9.1e-85 318.2 362 44.8
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 7.5e-79 298.5 191 73.3
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.4e-77 294.3 396 41.4
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.9e-74 283.9 157 84.1
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 8.0e-73 278.5 189 70.9
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 1.1e-61 241.5 200 64.5
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.2e-61 238.4 241 49.0
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.4e-56 224.6 196 58.7
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 1.3e-54 218.0 196 60.2
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 4.9e-54 216.1 229 49.3
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.2e-52 211.5 150 72.7
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.8e-52 208.8 161 62.7
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 5.6e-50 202.6 110 87.3
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 2.7e-44 183.7 151 65.6
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 3.9e-43 179.9 153 63.4
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 7.3e-42 175.6 139 66.2
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.1e-40 171.8 135 57.0
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 1.8e-40 171.0 232 40.1
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 2.4e-40 170.6 427 30.0
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 2.0e-39 167.5 361 31.0
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 7.6e-39 165.6 169 51.5
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 7.1e-37 159.1 93 81.7
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 5.8e-31 139.4 93 78.5
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 7.6e-31 139.0 363 31.7
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.8e-30 136.7 90 72.2
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 1.6e-25 121.3 457 25.8
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 4.9e-22 109.8 84 57.1
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 3.5e-20 103.6 221 33.5
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 3.0e-19 100.5 203 33.0
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 2.7e-12 77.4 79 49.4
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 3.5e-12 77.0 54 64.8
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 4.6e-12 76.6 72 58.3
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 1.4e-08 65.1 81 49.4


User provided reference genes

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