Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.7e-164 582.8 330 100.0
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.1e-59 234.6 291 52.6
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.6e-56 223.4 281 50.9
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 7.5e-56 221.9 198 66.7
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 5.4e-54 215.7 283 51.2
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.6e-53 214.2 278 51.4
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 3.5e-53 213.0 266 53.4
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.3e-52 211.1 286 54.5
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 6.5e-52 208.8 227 55.5
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 5.5e-51 205.7 300 54.0
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 6.1e-50 202.2 280 48.6
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 1.0e-49 201.4 197 56.3
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.4e-49 201.1 226 55.3
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.4e-49 201.1 280 48.6
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 1.5e-48 197.6 278 47.1
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.0e-48 197.2 294 47.3
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 2.0e-48 197.2 262 47.3
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 7.5e-48 195.3 207 53.1
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 6.3e-47 192.2 209 50.7
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.4e-46 190.3 292 48.6
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 4.1e-46 189.5 229 50.7
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 7.7e-45 185.3 242 47.9
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.0e-44 184.9 251 46.2
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.7e-44 184.1 202 50.0
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.3e-44 183.7 215 55.3
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 6.6e-44 182.2 219 51.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.5e-43 181.0 256 45.3
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.5e-43 181.0 287 43.6
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.3e-43 179.9 244 52.0
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 7.2e-43 178.7 291 41.9
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.2e-42 177.9 204 50.5
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 3.6e-42 176.4 210 50.0
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.7e-42 176.0 280 41.8
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 6.1e-42 175.6 241 46.5
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.0e-41 174.9 273 48.4
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 1.4e-41 174.5 201 52.7
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.8e-41 174.1 224 48.7
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.0e-41 173.3 282 42.2
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 3.0e-41 173.3 236 46.6
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 5.2e-41 172.6 267 44.9
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.9e-41 171.8 278 43.5
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 8.9e-41 171.8 233 47.6
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.2e-40 171.4 259 44.8
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 3.4e-40 169.9 279 43.7
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 4.4e-40 169.5 233 46.8
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 5.7e-40 169.1 282 45.7
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 9.8e-40 168.3 276 43.5
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.3e-39 167.9 201 50.7
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 1.3e-39 167.9 282 45.7
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.7e-39 167.5 226 48.2
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.7e-39 167.5 282 42.9
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 2.2e-39 167.2 233 46.4
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 2.9e-39 166.8 220 48.6
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.1e-38 164.9 332 38.9
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.1e-38 164.9 315 41.0
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.8e-38 164.1 254 43.7
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 2.4e-38 163.7 287 42.9
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 7.0e-38 162.2 173 52.0
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.2e-37 161.4 194 49.5
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 1.6e-37 161.0 279 43.4
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 2.7e-37 160.2 284 44.4
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 5.9e-37 159.1 287 43.2
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 5.9e-37 159.1 241 47.7
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 5.9e-37 159.1 314 42.4
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 3.9e-36 156.4 202 45.5
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 6.6e-36 155.6 278 42.8
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 2.5e-35 153.7 233 43.8
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 4.3e-35 152.9 314 38.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 7.3e-35 152.1 191 48.2
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 9.5e-35 151.8 206 46.1
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 9.5e-35 151.8 291 44.7
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 1.2e-34 151.4 231 46.8
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.2e-34 151.4 202 47.0
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 2.8e-34 150.2 196 48.5
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 2.8e-34 150.2 217 46.1
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 6.2e-34 149.1 200 47.0
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 6.2e-34 149.1 200 47.0
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 6.2e-34 149.1 200 47.0
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 6.8e-33 145.6 192 46.4
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 1.2e-32 144.8 196 42.3
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 2.6e-32 143.7 212 45.3
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 4.4e-32 142.9 217 41.9
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 5.8e-32 142.5 200 44.0
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 5.8e-32 142.5 200 44.0
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 5.8e-32 142.5 196 44.9
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 2.2e-31 140.6 277 37.2
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 6.4e-31 139.0 306 39.2
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.4e-30 137.9 276 44.6
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 2.4e-30 137.1 197 40.6
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 9.2e-30 135.2 192 41.1
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 4.6e-29 132.9 260 35.0
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 3.9e-28 129.8 237 37.6
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.5e-27 127.9 232 40.9
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 3.3e-27 126.7 212 42.0
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 6.2e-26 122.5 232 40.5
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.1e-25 121.7 121 60.3
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.8e-25 120.9 224 37.5
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 8.9e-25 118.6 266 37.2
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 1.5e-24 117.9 300 34.3
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 2.4e-22 110.5 206 36.9
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 4.9e-15 86.3 276 30.4
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 5.4e-14 82.8 178 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 1.0e-12 78.6 265 29.4
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 1.6e-10 71.2 177 33.9
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 1.1e-09 68.6 266 27.1


User provided reference genes

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