Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 4.1e-142 508.1 261 100.0
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.6e-141 506.1 261 99.6
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 1.5e-104 383.3 255 78.8
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 6.7e-100 367.9 250 76.0
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 7.4e-99 364.4 248 76.2
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 3.8e-95 352.1 247 73.7
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 4.6e-93 345.1 248 71.0
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 4.6e-93 345.1 249 71.1
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 1.0e-92 344.0 245 71.0
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 1.5e-91 340.1 243 70.0
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 1.9e-91 339.7 246 68.3
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 1.9e-91 339.7 252 71.8
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 9.6e-91 337.4 243 70.0
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 2.1e-90 336.3 234 73.1
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 2.8e-90 335.9 243 71.2
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 6.3e-90 334.7 249 68.7
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 8.2e-90 334.3 237 71.3
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 2.4e-89 332.8 250 67.2
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 4.1e-89 332.0 240 71.2
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 5.3e-89 331.6 247 68.0
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 9.0e-89 330.9 236 71.6
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 1.2e-88 330.5 249 67.5
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 1.5e-88 330.1 246 69.1
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 2.0e-88 329.7 249 67.5
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 2.0e-88 329.7 251 68.9
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 4.5e-88 328.6 248 66.1
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 4.5e-88 328.6 245 69.0
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 5.9e-88 328.2 249 67.1
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 7.6e-88 327.8 242 69.4
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 1.0e-87 327.4 247 67.2
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 3.8e-87 325.5 250 66.4
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 5.0e-87 325.1 254 66.1
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.1e-86 323.9 234 67.9
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 1.1e-86 323.9 230 71.7
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 3.2e-86 322.4 240 69.6
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 3.2e-86 322.4 243 69.1
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 7.2e-86 321.2 243 68.7
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 7.2e-86 321.2 251 67.3
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 9.3e-86 320.9 243 68.3
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 2.1e-85 319.7 241 66.4
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 2.1e-85 319.7 241 66.4
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 2.1e-85 319.7 243 68.3
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 3.5e-85 318.9 234 66.7
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 1.3e-84 317.0 231 70.1
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 1.3e-84 317.0 274 62.0
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 3.0e-84 315.8 206 75.7
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 5.1e-84 315.1 228 70.2
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 6.7e-84 314.7 232 67.2
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 3.3e-83 312.4 235 68.5
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 4.3e-83 312.0 236 68.2
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 5.7e-83 311.6 235 68.1
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 9.7e-83 310.8 232 69.0
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.3e-82 310.5 250 64.4
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 1.6e-82 310.1 233 68.7
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 2.8e-82 309.3 248 64.1
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 3.7e-82 308.9 225 68.9
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 4.8e-82 308.5 236 65.3
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 4.8e-82 308.5 241 63.5
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 6.3e-82 308.1 236 64.8
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 6.3e-82 308.1 230 66.1
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 6.3e-82 308.1 249 61.0
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 8.2e-82 307.8 241 66.0
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 1.4e-81 307.0 225 68.9
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.4e-81 307.0 231 64.1
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 1.4e-81 307.0 250 64.8
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.8e-81 306.6 233 68.2
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 2.4e-81 306.2 250 62.4
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 3.1e-81 305.8 243 61.3
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 3.1e-81 305.8 241 65.6
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 4.1e-81 305.4 247 64.4
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 4.1e-81 305.4 237 65.0
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 4.1e-81 305.4 234 64.5
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 5.3e-81 305.1 234 63.2
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 6.9e-81 304.7 243 63.8
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 6.9e-81 304.7 243 63.4
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 4.5e-80 302.0 252 61.1
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 4.5e-80 302.0 234 64.1
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 5.9e-80 301.6 234 64.1
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 5.9e-80 301.6 248 60.1
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 5.9e-80 301.6 248 60.1
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 1.0e-79 300.8 243 64.2
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 1.3e-79 300.4 223 64.6
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 2.2e-79 299.7 243 61.7
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 2.9e-79 299.3 241 64.7
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 8.5e-79 297.7 225 66.7
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 4.2e-78 295.4 235 66.0
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 1.8e-76 290.0 390 44.9
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 2.0e-75 286.6 233 62.7
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 5.7e-75 285.0 224 62.9
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 1.7e-74 283.5 250 58.4
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 8.2e-74 281.2 247 59.9
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 8.2e-74 281.2 201 70.1
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 6.9e-73 278.1 218 62.4
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 1.5e-72 276.9 250 60.0
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 2.0e-72 276.6 246 58.9
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 8.8e-68 261.2 256 57.8
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 2.7e-61 239.6 191 61.8
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 1.8e-57 226.9 242 50.4
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 3.1e-57 226.1 199 58.8
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 5.9e-56 221.9 218 52.3
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 3.8e-55 219.2 226 50.9
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.9e-54 216.9 190 59.5
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 5.4e-49 198.7 137 73.7
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 4.0e-44 182.6 248 43.1
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 3.4e-43 179.5 141 63.1
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 1.2e-37 161.0 110 72.7
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 2.6e-35 153.3 98 75.5
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 9.5e-30 134.8 121 56.2
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.7e-26 124.0 85 72.9
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 2.6e-19 100.1 234 32.9
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 3.3e-06 56.6 189 25.4
Cre01.g043050 Chlamydomonas reinhardtii HOM05D005243 ORTHO05D006670 9.6e-06 55.1 199 26.1


User provided reference genes

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