Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 1.7e-130 469.5 273 100.0
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 5.4e-28 129.0 189 60.8
Rhsim11G0096900 Rhododendron simsii HOM05D013055 ORTHO05D012930 1.1e-25 121.3 189 57.1
vmacro01576 Vaccinium macrocarpon HOM05D013055 ORTHO05D012930 7.6e-22 108.6 179 58.7
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.1e-18 95.9 184 51.6
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.1e-16 90.5 191 52.4
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.8e-16 89.4 185 53.5
Cc02_g35210 Coffea canephora HOM05D015885 ORTHO05D012930 6.2e-16 89.0 192 47.4
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 9.0e-15 85.1 174 40.2
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 4.5e-14 82.8 183 50.8
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.5e-14 82.8 184 50.5
Solyc01g100690.3 Solanum lycopersicum HOM05D015885 ORTHO05D012930 9.3e-12 75.1 193 45.1
Sopen01g044190 Solanum pennellii HOM05D015885 ORTHO05D012930 1.2e-11 74.7 193 45.6
PGSC0003DMG400002795 Solanum tuberosum HOM05D015885 ORTHO05D012930 1.2e-11 74.7 108 41.7
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 2.1e-11 73.9 189 33.3
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 7.9e-11 72.0 196 37.2
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 3.0e-10 70.1 182 48.4
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 3.0e-10 70.1 184 46.2
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 5.1e-10 69.3 184 47.8
Nitab4.5_0010074g0020 Nicotiana tabacum HOM05D015885 ORTHO05D012930 8.7e-10 68.6 187 44.4
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 1.5e-09 67.8 183 48.6
Nitab4.5_0001338g0030 Nicotiana tabacum HOM05D015885 ORTHO05D012930 3.3e-09 66.6 107 40.2
SalBow3G0760 Salvia bowleyana HOM05D020384 ORTHO05D012930 5.7e-09 65.9 176 38.6
CiPaw.08G154700 Carya illinoinensis HOM05D013055 ORTHO05D014149 9.7e-09 65.1 189 47.1
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 1.3e-08 64.7 208 44.2
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 1.3e-08 64.7 208 44.2
Peaxi162Scf00357g00830 Petunia axillaris HOM05D015885 ORTHO05D012930 1.3e-08 64.7 231 39.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 1.6e-08 64.3 190 34.2
CAN.G1076.30 Capsicum annuum HOM05D015885 ORTHO05D012930 3.7e-08 63.2 108 37.0
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 3.7e-08 63.2 182 35.7
DCAR_025289 Daucus carota HOM05D013055 ORTHO05D012930 6.3e-08 62.4 181 45.3
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 1.4e-07 61.2 178 35.4
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 3.1e-07 60.1 185 37.3
CDE05G3151 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 4.1e-07 59.7 155 45.2
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 4.1e-07 59.7 197 42.6
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 6.9e-07 58.9 206 33.0
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 6.9e-07 58.9 185 45.4
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 9.0e-07 58.5 208 42.8
Oeu064831.1 Olea europaea HOM05D020384 ORTHO05D012930 1.2e-06 58.2 186 46.2
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 1.5e-06 57.8 170 30.6
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 2.6e-06 57.0 206 42.2
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 3.4e-06 56.6 201 41.3
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 4.5e-06 56.2 104 37.5
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.0e-05 55.1 173 31.2
FAN09G2530 Fragaria x ananassa HOM05D018542 ORTHO05D014149 1.0e-05 55.1 185 28.6


User provided reference genes

Program Settings