Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 7.8e-109 397.1 199 100.0
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.4e-97 359.0 197 92.9
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.1e-97 358.6 197 92.9
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.7e-95 352.8 197 92.4
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.6e-93 344.7 198 90.9
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.6e-93 344.7 198 90.9
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.3e-92 343.2 198 90.9
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.1e-57 227.3 178 70.2
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.3e-57 224.9 178 70.2
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 3.8e-47 192.2 138 71.0
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 9.4e-46 187.6 141 67.4
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 5.7e-43 178.3 146 64.4
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 2.7e-37 159.5 138 60.9
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 2.7e-37 159.5 138 60.9
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 2.7e-37 159.5 138 60.9
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 2.7e-37 159.5 138 60.9
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 5.9e-32 141.7 137 51.8
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 6.5e-31 138.3 126 54.0
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 1.1e-30 137.5 133 53.4
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 5.5e-30 135.2 131 55.0
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 7.2e-30 134.8 142 47.9
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 9.5e-30 134.4 157 43.9
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 8.0e-29 131.3 131 50.4
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 1.8e-28 130.2 127 54.3
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 6.8e-28 128.3 131 47.3
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 1.5e-27 127.1 131 51.1
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 2.0e-27 126.7 135 48.9
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 2.0e-27 126.7 127 48.8
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 2.6e-27 126.3 139 46.0
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 3.4e-27 125.9 136 46.3
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 1.3e-26 124.0 127 50.4
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 1.3e-26 124.0 148 42.6
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 1.7e-26 123.6 131 47.3
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 2.2e-26 123.2 127 48.0
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 4.1e-25 119.0 134 45.5
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 7.0e-25 118.2 146 43.2
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 7.0e-25 118.2 131 45.8
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 9.2e-25 117.9 131 45.8
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 9.2e-25 117.9 137 48.9
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.0e-24 116.7 131 44.3
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 3.5e-24 115.9 136 44.1
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 2.3e-23 113.2 131 45.0
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 3.8e-23 112.5 130 41.5
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 8.6e-23 111.3 141 45.4
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 1.1e-22 110.9 131 42.0
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 1.5e-22 110.5 128 45.3
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 2.5e-22 109.8 129 44.2
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 3.3e-22 109.4 131 45.0
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 7.3e-22 108.2 134 41.0
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 1.6e-21 107.1 146 40.4
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 1.6e-21 107.1 135 45.9
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 1.0e-20 104.4 131 40.5
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 1.0e-20 104.4 131 40.5
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 1.0e-20 104.4 140 40.7
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 1.0e-20 104.4 131 45.0
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 1.4e-20 104.0 137 44.5
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 1.8e-20 103.6 112 50.0
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 3.0e-20 102.8 185 40.0
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 4.4e-19 99.0 130 43.1
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 7.5e-19 98.2 137 42.3
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 7.5e-19 98.2 141 36.2
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 1.7e-18 97.1 147 43.5
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 3.7e-18 95.9 137 40.9
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 1.1e-17 94.4 135 34.8
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 1.8e-17 93.6 130 42.3
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 1.2e-16 90.9 123 39.8
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 1.6e-13 80.5 61 55.7
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 1.6e-13 80.5 138 35.5
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 2.8e-13 79.7 75 52.0
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 1.5e-11 73.9 60 53.3
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 2.6e-11 73.2 96 36.5
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 3.4e-11 72.8 56 57.1
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 1.3e-10 70.9 131 36.6
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 2.9e-10 69.7 105 37.1
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 3.0e-07 59.7 47 55.3


User provided reference genes

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