Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 2.3e-279 964.9 480 100.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 9.7e-230 800.0 466 82.6
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 1.6e-229 799.3 467 81.6
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.1e-228 796.6 466 82.8
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 5.3e-228 794.3 467 80.7
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 4.5e-227 791.2 477 79.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.4e-225 786.2 465 79.1
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.2e-225 785.0 460 81.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 9.4e-225 783.5 548 73.4
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 3.6e-224 781.6 466 80.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 6.7e-223 777.3 470 78.7
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 8.8e-223 776.9 503 75.3
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.0e-222 775.8 464 79.1
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 3.3e-222 775.0 470 79.6
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 4.3e-222 774.6 471 78.6
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 5.7e-222 774.2 474 78.7
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.8e-221 771.9 466 79.2
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.8e-221 771.9 468 79.7
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 2.8e-221 771.9 465 78.9
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 4.8e-221 771.2 465 78.5
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 4.8e-221 771.2 473 78.4
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 8.2e-221 770.4 462 79.2
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 5.3e-220 767.7 470 76.4
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.5e-219 766.1 490 76.7
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 7.7e-219 763.8 470 78.3
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.4e-217 759.6 468 76.3
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 7.2e-217 757.3 471 77.1
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 9.4e-217 756.9 463 78.4
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 6.1e-216 754.2 466 77.3
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 7.9e-216 753.8 465 77.4
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.3e-215 752.3 500 72.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 3.0e-215 751.9 463 76.2
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 3.0e-215 751.9 459 78.0
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.9e-215 751.5 503 72.0
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.4e-214 748.0 500 71.8
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 5.7e-214 747.7 492 74.8
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 2.8e-213 745.3 471 74.9
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 6.3e-213 744.2 459 76.9
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 4.1e-212 741.5 461 75.7
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 7.0e-212 740.7 464 77.8
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 5.9e-211 737.6 469 75.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 2.2e-210 735.7 459 76.9
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 8.5e-210 733.8 459 75.8
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.9e-209 732.6 459 75.8
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 5.5e-209 731.1 462 75.3
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 9.4e-209 730.3 472 78.2
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 9.4e-209 730.3 505 71.5
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.4e-207 726.5 465 74.4
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 3.0e-207 725.3 464 74.8
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 9.7e-206 720.3 460 73.7
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.2e-205 719.2 544 66.2
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 9.1e-204 713.8 463 74.1
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 9.1e-204 713.8 458 73.4
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.6e-203 712.2 465 72.0
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.6e-195 686.4 466 68.5
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 5.9e-195 684.5 501 66.3
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 3.4e-190 668.7 400 78.5
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 7.5e-190 667.5 470 72.6
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.8e-189 664.8 470 68.7
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.1e-188 663.7 470 68.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 4.1e-188 661.8 461 67.7
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.3e-186 656.0 384 81.8
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 2.5e-185 652.5 411 74.7
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 9.5e-185 650.6 390 79.0
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 2.8e-184 649.0 459 65.6
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 3.0e-183 645.6 464 68.8
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 8.9e-183 644.0 396 77.0
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 8.9e-183 644.0 396 77.0
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.4e-182 642.1 461 63.8
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.9e-181 638.3 460 67.0
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.1e-175 619.0 421 70.1
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 8.9e-175 617.5 386 76.9
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.9e-173 612.5 463 64.6
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.7e-170 603.2 363 80.4
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 5.8e-166 588.2 555 56.4
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.2e-163 580.5 327 85.6
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 5.1e-162 575.1 472 61.4
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 5.8e-158 561.6 389 75.8
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.0e-154 550.8 365 74.2
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.1e-151 540.8 330 77.6
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 2.5e-121 439.9 285 74.4
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.7e-104 382.9 231 78.8
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 3.0e-74 283.5 168 80.4
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 5.6e-68 262.7 446 32.7
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.0e-66 258.5 154 81.8
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 5.8e-57 226.1 235 55.7
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.3e-53 214.2 159 69.2
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.4e-47 193.0 119 74.8
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 3.2e-31 140.6 434 26.5
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.2e-22 112.1 395 25.3
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.0e-21 109.0 77 63.6
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 4.5e-17 93.6 420 23.8
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.7e-14 84.3 58 69.0
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 3.7e-11 73.9 390 24.1
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 2.9e-08 64.3 351 23.1
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.1e-07 62.4 52 51.9


User provided reference genes

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