Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041904 Camellia sinensis var. sinensis HOM05D001872 ORTHO05D110342 1.6e-31 138.7 63 100.0
Actinidia06498 Actinidia chinensis HOM05D001872 ORTHO05D001859 9.4e-08 59.7 27 96.3
Hma1.2p1_1840F.1_g304910 Hydrangea macrophylla HOM05D001872 ORTHO05D001859 9.4e-08 59.7 27 96.3
Rhsim10G0176600 Rhododendron simsii HOM05D001872 ORTHO05D001859 9.4e-08 59.7 27 96.3
TWI74G0910 Tripterygium wilfordii HOM05D001872 ORTHO05D001859 1.6e-07 58.9 28 92.9
vmacro07689 Vaccinium macrocarpon HOM05D001872 ORTHO05D001859 2.1e-07 58.5 27 92.6
Nn4g24241 Nelumbo nucifera HOM05D001872 ORTHO05D001859 4.6e-07 57.4 27 92.6
TWI53G0262 Tripterygium wilfordii HOM05D001872 ORTHO05D001859 4.6e-07 57.4 28 89.3
Cpa.g.sc116.44 Carica papaya HOM05D001872 ORTHO05D001859 7.9e-07 56.6 26 88.5
Hma1.2p1_0524F.1_g172320 Hydrangea macrophylla HOM05D001872 ORTHO05D001859 7.9e-07 56.6 27 92.6
Manes.01G117300 Manihot esculenta HOM05D001872 ORTHO05D001859 7.9e-07 56.6 28 85.7
Cc07_g13580 Coffea canephora HOM05D001872 ORTHO05D001859 1.4e-06 55.8 28 85.7
PSO017G7208 Papaver somniferum HOM05D001872 ORTHO05D001859 1.4e-06 55.8 27 85.2
PSO478G2521 Papaver somniferum HOM05D001872 ORTHO05D001859 1.4e-06 55.8 27 85.2
Lj4A264T56 Lonicera japonica HOM05D001872 ORTHO05D001859 1.8e-06 55.5 27 88.9
CiPaw.03G071000 Carya illinoinensis HOM05D001872 ORTHO05D001859 2.3e-06 55.1 28 82.1
Atru.chr1.1879 Acer truncatum HOM05D001872 ORTHO05D001859 3.0e-06 54.7 27 81.5
GSVIVG01030734001 Vitis vinifera HOM05D001872 ORTHO05D001859 3.0e-06 54.7 26 92.3
MSTRG.15675 Avicennia marina HOM05D001872 ORTHO05D001859 3.9e-06 54.3 28 85.7
MELO3C020204.2 Cucumis melo HOM05D001872 ORTHO05D001859 5.1e-06 53.9 28 82.1
CsaV3_3G020840 Cucumis sativus L. HOM05D001872 ORTHO05D001859 5.1e-06 53.9 28 82.1
Gohir.D07G083700 Gossypium hirsutum HOM05D001872 ORTHO05D001859 5.1e-06 53.9 27 85.2
Gorai.001G089300 Gossypium raimondii HOM05D001872 ORTHO05D001859 5.1e-06 53.9 27 85.2
Thecc.04G117000 Theobroma cacao HOM05D001872 ORTHO05D001859 5.1e-06 53.9 27 85.2
Ciclev10012501m.g Citrus clementina HOM05D001872 ORTHO05D001859 6.7e-06 53.5 27 81.5
Psat5g121240 Pisum sativum HOM05D001872 ORTHO05D001859 6.7e-06 53.5 27 85.2
Solyc11g011250.3 Solanum lycopersicum HOM05D001872 ORTHO05D001859 6.7e-06 53.5 28 82.1
PGSC0003DMG400015691 Solanum tuberosum HOM05D001872 ORTHO05D001859 6.7e-06 53.5 28 82.1
SGA_v2.0_scaffold45G17188 Striga asiatica HOM05D001872 ORTHO05D001859 6.7e-06 53.5 27 85.2
Actinidia17216 Actinidia chinensis HOM05D001872 ORTHO05D001859 8.8e-06 53.1 27 85.2
Lj6g0002910 Lotus japonicus HOM05D001872 ORTHO05D001859 8.8e-06 53.1 28 78.6
Potri.017G125100 Populus trichocarpa HOM05D001872 ORTHO05D001859 8.8e-06 53.1 27 85.2
Sed0006690 Sechium edule HOM05D001872 ORTHO05D001859 8.8e-06 53.1 28 82.1
TPR.G14055 Trifolium pratense HOM05D001872 ORTHO05D001859 8.8e-06 53.1 27 85.2
Zm00001eb279790 Zea mays HOM05D001872 ORTHO05D001859 8.8e-06 53.1 28 82.1


User provided reference genes

Program Settings