Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041878 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.3e-41 172.2 114 100.0
CSS0011685 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.4e-38 162.2 114 96.5
CSS0034746 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.4e-38 162.2 114 96.5
CSS0039761 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.4e-38 162.2 114 96.5
CSS0043613 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.4e-38 162.2 114 96.5
CSS0002691 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.2e-37 159.8 114 95.6
CSS0048808 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.2e-37 159.8 114 94.7
CSS0021625 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.1e-37 159.1 114 95.6
CSS0027278 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 3.5e-37 158.3 114 95.6
Dinv27907 Davidia involucrata HOM05D002792 ORTHO05D003039 1.4e-17 93.2 90 60.0
Actinidia30279 Actinidia chinensis HOM05D002792 ORTHO05D003039 1.2e-16 90.1 87 60.9
TAR626G1718 Trochodendron aralioides HOM05D002792 ORTHO05D003039 3.4e-16 88.6 89 52.8
Hma1.2p1_0049F.1_g028510 Hydrangea macrophylla HOM05D002792 ORTHO05D003039 1.3e-15 86.7 90 56.7
CSS0012947 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.1e-14 83.6 75 66.7
Sc23g0005200 Simmondsia chinensis HOM05D002792 ORTHO05D003039 1.1e-14 83.6 87 52.9
CiPaw.08G026100 Carya illinoinensis HOM05D002792 ORTHO05D003039 1.4e-14 83.2 88 56.8
vmacro11056 Vaccinium macrocarpon HOM05D002792 ORTHO05D003039 1.4e-14 83.2 54 79.6
Oeu043885.1 Olea europaea HOM05D002792 ORTHO05D003039 3.2e-14 82.0 87 55.2
Rhsim02G0176900 Rhododendron simsii HOM05D002792 ORTHO05D003039 4.2e-14 81.6 52 80.8
Cc08_g09690 Coffea canephora HOM05D002792 ORTHO05D003039 9.3e-14 80.5 87 52.9
GSVIVG01035616001 Vitis vinifera HOM05D002792 ORTHO05D003039 2.1e-13 79.3 54 75.9
Prupe.1G447600 Prunus persica HOM05D002792 ORTHO05D003039 6.0e-13 77.8 87 51.7
SalBow1G0964 Salvia bowleyana HOM05D002792 ORTHO05D003039 1.3e-12 76.6 87 51.7
Manes.03G059000 Manihot esculenta HOM05D002792 ORTHO05D003039 2.3e-12 75.9 88 52.3
FvH4_2g35470 Fragaria vesca HOM05D002792 ORTHO05D003039 3.9e-12 75.1 87 50.6
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 3.9e-12 75.1 87 50.6
Lj8A578G16 Lonicera japonica HOM05D002792 ORTHO05D003039 3.9e-12 75.1 88 53.4
RcHm_v2.0_Chr6g0306411 Rosa chinensis HOM05D002792 ORTHO05D003039 8.7e-12 73.9 88 52.3
Ciclev10009570m.g Citrus clementina HOM05D002792 ORTHO05D003039 1.1e-11 73.6 55 74.5
FAN15G1596 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.9e-11 72.8 88 51.1
Phvul.009G110200 Phaseolus vulgaris HOM05D002792 ORTHO05D003039 1.9e-11 72.8 88 50.0
Thecc.09G045800 Theobroma cacao HOM05D002792 ORTHO05D003039 1.9e-11 72.8 87 50.6
Glyma.06G086200 Glycine max HOM05D002792 ORTHO05D003039 3.3e-11 72.0 88 50.0
Atru.chr7.2082 Acer truncatum HOM05D002792 ORTHO05D003039 4.3e-11 71.6 90 48.9
Glyma.04G084600 Glycine max HOM05D002792 ORTHO05D003039 4.3e-11 71.6 86 48.8
Lsat_1_v5_gn_5_33680 Lactuca sativa HOM05D002792 ORTHO05D003039 7.4e-11 70.9 87 48.3
Lj8C574G4 Lonicera japonica HOM05D002792 ORTHO05D003039 7.4e-11 70.9 51 70.6
MD15G1092700 Malus domestica HOM05D002792 ORTHO05D003039 7.4e-11 70.9 82 52.4
QL12p041309 Quercus lobata HOM05D002792 ORTHO05D003039 7.4e-11 70.9 91 49.5
CANSAT25G1031 Cannabis sativa HOM05D002792 ORTHO05D003039 9.6e-11 70.5 50 70.0
ClCG11G015150 Citrullus lanatus HOM05D002792 ORTHO05D003039 9.6e-11 70.5 87 49.4
MELO3C003464.2 Cucumis melo HOM05D002792 ORTHO05D003039 9.6e-11 70.5 87 49.4
CsaV3_3G048550 Cucumis sativus L. HOM05D002792 ORTHO05D003039 9.6e-11 70.5 87 49.4
Sed0001182 Sechium edule HOM05D002792 ORTHO05D003039 9.6e-11 70.5 89 50.6
Hund19508 Selenicereus undatus HOM05D002792 ORTHO05D003039 9.6e-11 70.5 82 51.2
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 1.3e-10 70.1 81 45.7
Lalb_Chr08g0243041 Lupinus albus HOM05D002792 ORTHO05D003039 2.1e-10 69.3 76 51.3
Nitab4.5_0001515g0040 Nicotiana tabacum HOM05D002792 ORTHO05D003039 2.1e-10 69.3 48 66.7
Nn2g11610 Nelumbo nucifera HOM05D002792 ORTHO05D003039 2.8e-10 68.9 87 46.0
Potri.006G237900 Populus trichocarpa HOM05D002792 ORTHO05D003039 2.8e-10 68.9 54 68.5
Lj1g0023402 Lotus japonicus HOM05D002792 ORTHO05D003039 4.8e-10 68.2 55 63.6
Peaxi162Scf00227g00109 Petunia axillaris HOM05D002792 ORTHO05D003039 4.8e-10 68.2 42 73.8
Medtr3g109700 Medicago truncatula HOM05D002792 ORTHO05D003039 6.2e-10 67.8 87 47.1
PGSC0003DMG400002231 Solanum tuberosum HOM05D002792 ORTHO05D003039 6.2e-10 67.8 76 50.0
HanXRQChr16g0509381 Helianthus annuus HOM05D002792 ORTHO05D003039 1.1e-09 67.0 87 47.1
CAN.G400.15 Capsicum annuum HOM05D002792 ORTHO05D003039 1.4e-09 66.6 76 46.1
Eucgr.C00554 Eucalyptus grandis HOM05D002792 ORTHO05D003039 1.4e-09 66.6 46 65.2
Sabra06G0186200 Salix brachista HOM05D002792 ORTHO05D003039 1.4e-09 66.6 54 66.7
THA.LOC104803806 Tarenaya hassleriana HOM05D002792 ORTHO05D003039 1.8e-09 66.2 87 46.0
arahy.Tifrunner.gnm1.ann1.FW97GV Arachis hypogaea HOM05D002792 ORTHO05D003039 4.0e-09 65.1 75 49.3
Nitab4.5_0003794g0060 Nicotiana tabacum HOM05D002792 ORTHO05D003039 4.0e-09 65.1 48 62.5
EL10Ac2g04008 Beta vulgaris HOM05D002792 ORTHO05D003039 6.9e-09 64.3 75 49.3
Eucgr.C00600 Eucalyptus grandis HOM05D002792 ORTHO05D003039 6.9e-09 64.3 47 66.0
Psat5g021080 Pisum sativum HOM05D002792 ORTHO05D003039 6.9e-09 64.3 79 45.6
Solyc08g066540.3 Solanum lycopersicum HOM05D002792 ORTHO05D003039 6.9e-09 64.3 72 50.0
arahy.Tifrunner.gnm1.ann1.GFJ9I4 Arachis hypogaea HOM05D002792 ORTHO05D003039 1.2e-08 63.5 75 48.0
PGR031G0555 Punica granatum HOM05D002792 ORTHO05D003039 1.2e-08 63.5 87 44.8
Gorai.009G049500 Gossypium raimondii HOM05D002792 ORTHO05D003039 1.5e-08 63.2 88 48.9
Sopen08g020380 Solanum pennellii HOM05D002792 ORTHO05D003039 1.5e-08 63.2 79 45.6
Eucgr.C02937 Eucalyptus grandis HOM05D002792 ORTHO05D003039 2.6e-08 62.4 42 64.3
Glyma.14G143300 Glycine max HOM05D002792 ORTHO05D003039 2.6e-08 62.4 76 47.4
PSO210G0529 Papaver somniferum HOM05D002792 ORTHO05D003039 3.4e-08 62.0 91 42.9
PSO210G7550 Papaver somniferum HOM05D002792 ORTHO05D003039 4.5e-08 61.6 91 42.9
AUR62042437 Chenopodium quinoa HOM05D002792 ORTHO05D003039 2.2e-07 59.3 78 46.2
Migut.E01530 Erythranthe guttata HOM05D002792 ORTHO05D003039 2.2e-07 59.3 77 42.9
Aqoxy7G03895 Aquilegia oxysepala HOM05D002792 ORTHO05D003039 2.9e-07 58.9 90 38.9
AUR62009270 Chenopodium quinoa HOM05D002792 ORTHO05D003039 2.9e-07 58.9 78 46.2
Ah.09g228070 Amaranthus hybridus HOM05D002792 ORTHO05D003039 3.2e-06 55.5 77 41.6
ECA246G3749 Erigeron canadensis HOM05D002792 ORTHO05D003039 9.3e-06 53.9 91 57.1


User provided reference genes

Program Settings