Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041823 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 4.7e-42 174.1 87 100.0
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 9.2e-14 80.1 78 56.4
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 1.9e-11 72.4 80 53.8
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 2.1e-10 68.9 80 51.2
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 1.8e-09 65.9 78 50.0
TAR623G0335 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.5e-08 62.8 85 43.5
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 3.4e-08 61.6 76 55.3
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 5.8e-08 60.8 77 49.4
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 2.2e-07 58.9 77 49.4
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 4.9e-07 57.8 81 50.6
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 6.4e-07 57.4 91 41.8
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 6.4e-07 57.4 77 45.5
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 6.4e-07 57.4 91 41.8
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 6.4e-07 57.4 80 45.0
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 6.4e-07 57.4 79 44.3
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 1.1e-06 56.6 84 44.0
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 2.4e-06 55.5 82 46.3
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 4.2e-06 54.7 88 43.2
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.1e-06 53.9 78 44.9
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.1e-06 53.9 78 44.9


User provided reference genes

Program Settings