Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 0.0e+00 1309.3 707 100.0
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.7e-126 457.6 770 45.1
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-80 305.4 744 38.3
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.1e-71 274.6 829 33.8
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 6.9e-67 259.6 821 32.5
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 4.5e-66 256.9 804 32.5
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.0e-65 255.8 764 33.9
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.7e-65 255.0 862 31.3
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.6e-63 248.4 803 34.2
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 4.8e-60 236.9 864 30.8
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.2e-58 232.3 806 31.6
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 9.7e-53 212.6 881 27.4
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 2.2e-49 201.4 815 29.9
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 6.7e-46 189.9 889 28.2
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 3.7e-44 184.1 784 29.1
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 2.6e-42 177.9 687 30.9
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 2.6e-42 177.9 717 30.1
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 3.5e-42 177.6 815 28.7
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 3.0e-38 164.5 820 26.3
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 5.2e-38 163.7 814 27.0
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 9.7e-37 159.5 781 28.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.8e-36 157.9 776 28.2
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.8e-36 157.9 776 28.2
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.4e-35 154.8 776 27.7
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 5.3e-35 153.7 705 28.1
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.2e-34 152.5 313 42.8
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 1.6e-34 152.1 747 28.9
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 8.5e-33 146.4 779 28.1
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 4.2e-32 144.1 787 27.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.2e-32 143.3 798 26.9
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 1.0e-30 139.4 270 40.4
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 2.3e-30 138.3 762 28.7
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 5.2e-30 137.1 787 27.2
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 4.4e-29 134.0 356 32.9
Actinidia40109 Actinidia chinensis HOM05D008144 ORTHO05D010081 4.4e-29 134.0 788 28.6
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 9.8e-29 132.9 773 26.6
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 2.2e-28 131.7 561 29.9
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 7.2e-24 116.7 763 28.0
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 2.8e-23 114.8 1118 22.8
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 4.7e-23 114.0 761 28.0
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 2.6e-21 108.2 133 48.9
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 4.4e-21 107.5 527 25.4
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 6.3e-20 103.6 534 28.5
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 2.0e-18 98.6 776 25.0
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 3.5e-18 97.8 156 39.1
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 5.9e-18 97.1 811 25.0
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.3e-17 95.9 220 35.5
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 8.6e-17 93.2 264 32.2
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.5e-16 92.4 514 26.5
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 2.5e-16 91.7 369 30.9
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 2.5e-16 91.7 757 24.0
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 4.7e-15 87.4 421 27.1
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 2.3e-14 85.1 752 26.1
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 2.0e-13 82.0 522 24.7
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 7.5e-13 80.1 439 26.7
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 9.8e-13 79.7 415 26.0
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 9.8e-13 79.7 562 26.5
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 2.2e-12 78.6 166 34.9
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 2.9e-12 78.2 504 27.0
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 8.3e-12 76.6 724 24.3
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 1.1e-11 76.3 463 26.3
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 7.8e-10 70.1 457 26.7
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.3e-09 69.3 710 24.6
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.7e-09 68.9 739 25.7
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 1.9e-08 65.5 380 27.6
MD16G1201900 Malus domestica HOM05D008144 ORTHO05D010081 5.6e-08 63.9 77 51.9
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 7.3e-08 63.5 795 22.4
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 2.1e-07 62.0 771 22.6
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 4.0e-06 57.8 360 25.8
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 5.2e-06 57.4 167 31.1


User provided reference genes

Program Settings