Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041803 Camellia sinensis var. sinensis HOM05D015228 ORTHO05D011666 1.0e-30 136.0 63 100.0
Atru.chr8.2339 Acer truncatum HOM05D015228 ORTHO05D011666 1.1e-19 99.4 61 67.2
CSS0035305 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D011666 2.5e-16 88.2 45 91.1
MD12G1180100 Malus domestica HOM05D015228 ORTHO05D011666 6.1e-15 83.6 61 59.0
Solyc10g076330.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 3.3e-13 77.8 57 61.4
MELO3C033863.2 Cucumis melo HOM05D015228 ORTHO05D011666 1.6e-12 75.5 58 53.4
CDE07G1739 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 1.8e-11 72.0 58 56.9
COL.COLO4_24866 Corchorus olitorius HOM05D000475 ORTHO05D000343 2.4e-11 71.6 75 44.0
arahy.Tifrunner.gnm1.ann1.BL5G13 Arachis hypogaea HOM05D000475 ORTHO05D000343 5.3e-11 70.5 50 60.0
AUR62030756 Chenopodium quinoa HOM05D000475 ORTHO05D000343 3.2e-08 61.2 70 48.6
Glyma.01G126501 Glycine max HOM05D015228 ORTHO05D011666 2.7e-07 58.2 57 52.6
Ca_26194_v3 Cicer arietinum L. HOM05D000475 ORTHO05D000343 1.0e-06 56.2 59 50.8
SGA_v2.0_scaffold240G44069 Striga asiatica HOM05D000475 ORTHO05D000343 1.0e-06 56.2 58 51.7
Lalb_Chr07g0191001 Lupinus albus HOM05D000475 ORTHO05D011666 1.8e-06 55.5 61 44.3
Psat7g248960 Pisum sativum HOM05D000475 ORTHO05D000343 2.3e-06 55.1 54 44.4
Medtr1g018685 Medicago truncatula HOM05D047788 ORTHO05D011666 3.9e-06 54.3 57 40.4
Lj4g0019173 Lotus japonicus HOM05D000475 ORTHO05D000343 8.8e-06 53.1 57 50.9


User provided reference genes

Program Settings