Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 1.6e-67 259.2 127 100.0
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 2.2e-64 248.8 127 96.9
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 4.6e-62 241.1 127 94.5
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 1.5e-57 226.1 127 88.2
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 4.6e-46 188.0 131 76.3
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 2.3e-45 185.7 136 74.3
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 1.8e-26 122.9 117 61.5
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 1.2e-25 120.2 130 59.2
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 1.9e-23 112.8 104 64.4
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 4.2e-23 111.7 130 55.4
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 2.7e-22 109.0 107 61.7
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 4.8e-19 98.2 106 58.5
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 8.2e-19 97.4 98 59.2
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 1.4e-18 96.7 144 44.4
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 3.1e-18 95.5 94 60.6
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 2.0e-17 92.8 95 60.0
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 1.9e-15 86.3 79 59.5
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 1.6e-14 83.2 76 65.8
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 2.3e-13 79.3 76 59.2
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 2.3e-13 79.3 76 59.2
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 3.0e-13 79.0 42 92.9
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 3.0e-13 79.0 42 92.9
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 6.7e-13 77.8 43 88.4
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 1.1e-12 77.0 63 68.3
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 2.5e-12 75.9 43 88.4
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 3.3e-12 75.5 41 90.2
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 3.3e-12 75.5 41 90.2
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 5.7e-12 74.7 42 85.7
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 5.7e-12 74.7 42 85.7
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 5.7e-12 74.7 42 85.7
Zm00001eb439260 Zea mays HOM05D010106 ORTHO05D000626 5.7e-12 74.7 42 85.7
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 7.4e-12 74.3 76 61.8
CsaV3_6G018510 Cucumis sativus L. HOM05D012847 ORTHO05D014920 1.3e-11 73.6 54 70.4
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 1.7e-11 73.2 73 57.5
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-11 72.8 42 85.7
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 3.7e-11 72.0 158 41.8
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 4.8e-11 71.6 42 88.1
Oeu043254.2 Olea europaea HOM05D000920 ORTHO05D022949 4.8e-11 71.6 41 85.4
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 8.2e-11 70.9 40 82.5
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 1.1e-10 70.5 75 60.0
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 1.8e-10 69.7 79 53.2
Zm00001eb436930 Zea mays HOM05D010106 ORTHO05D000626 1.8e-10 69.7 132 40.9
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 2.4e-10 69.3 42 83.3
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 3.1e-10 68.9 98 52.0
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 5.3e-10 68.2 42 85.7
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 1.2e-09 67.0 43 79.1
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 1.2e-09 67.0 43 81.4
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 1.5e-09 66.6 70 55.7
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 2.0e-09 66.2 42 81.0
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 2.6e-09 65.9 33 93.9
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 2.6e-09 65.9 33 93.9
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 5.9e-09 64.7 60 63.3
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-08 63.9 43 79.1
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 1.3e-08 63.5 38 86.8
CBR_g56703 Chara braunii HOM05D010018 ORTHO05D004854 1.3e-08 63.5 84 47.6
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.0e-08 61.6 30 96.7
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.0e-08 61.6 30 96.7
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.0e-08 61.6 30 96.7
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 5.0e-08 61.6 30 96.7
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 6.5e-08 61.2 70 52.9
Zm00001eb262370 Zea mays HOM05D010106 ORTHO05D000626 8.5e-08 60.8 31 87.1
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 1.1e-07 60.5 31 93.5
A05p22320 Brassica napus HOM05D012847 ORTHO05D020225 1.4e-07 60.1 47 66.0
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 1.4e-07 60.1 48 68.8
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 1.4e-07 60.1 48 68.8
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 1.4e-07 60.1 48 68.8
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 1.4e-07 60.1 48 68.8
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 1.9e-07 59.7 43 72.1
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 3.2e-07 58.9 28 100.0
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 3.2e-07 58.9 31 90.3
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 4.2e-07 58.5 42 69.0
Oeu053430.1 Olea europaea HOM05D000920 ORTHO05D000626 7.2e-07 57.8 40 67.5
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 7.2e-07 57.8 33 84.8
HPP92_006525 Vanilla planifolia HOM05D000920 ORTHO05D004854 7.2e-07 57.8 63 55.6
BcaC08g42807 Brassica carinata HOM05D012847 ORTHO05D014920 1.6e-06 56.6 50 60.0
A05p22300 Brassica napus HOM05D000920 ORTHO05D003704 1.6e-06 56.6 47 61.7
Oeu009014.1 Olea europaea HOM05D026590 ORTHO05D004854 1.6e-06 56.6 42 71.4
Atru.chr9.100 Acer truncatum HOM05D000920 ORTHO05D000626 2.1e-06 56.2 30 86.7
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 2.1e-06 56.2 40 65.0
ECA240G4657 Erigeron canadensis HOM05D000920 ORTHO05D004854 7.9e-06 54.3 27 92.6
unitig_8.g4073 Utricularia gibba HOM05D000920 ORTHO05D004854 7.9e-06 54.3 81 46.9


User provided reference genes

Program Settings