Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041767 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.8e-26 122.1 64 100.0
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.3e-21 105.9 68 88.2
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.8e-19 98.2 68 83.8
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 4.9e-16 87.4 67 80.6
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.0e-15 83.6 67 77.6
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 1.1e-12 76.3 66 69.7
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 3.3e-12 74.7 64 68.8
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 4.3e-12 74.3 66 68.2
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 4.3e-12 74.3 66 68.2
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 4.3e-12 74.3 66 68.2
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.0e-10 69.7 67 61.2
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 3.1e-10 68.2 68 60.3
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 3.1e-10 68.2 67 64.2
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 1.5e-09 65.9 66 60.6
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 4.4e-09 64.3 67 62.7
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.7e-08 62.4 69 65.2
CSS0049920 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 2.2e-08 62.0 57 73.7
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 2.2e-08 62.0 66 59.1
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 2.2e-08 62.0 66 59.1
CSS0041307 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 3.7e-08 61.2 57 71.9
Rhsim13G0082700 Rhododendron simsii HOM05D002160 ORTHO05D002012 6.4e-08 60.5 67 59.7
CSS0046936 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D024696 3.2e-07 58.2 57 71.9
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 4.1e-07 57.8 77 59.7
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 4.1e-07 57.8 67 59.7
vmacro03072 Vaccinium macrocarpon HOM05D002160 ORTHO05D002012 1.6e-06 55.8 47 61.7
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.5e-06 54.7 75 57.3
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 4.6e-06 54.3 68 52.9
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 4.6e-06 54.3 67 56.7
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 7.8e-06 53.5 73 53.4


User provided reference genes

Program Settings