Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041764 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D043297 7.5e-29 129.8 64 100.0
CSS0009541 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 5.7e-21 103.6 58 87.9
CSS0028375 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 5.7e-21 103.6 58 87.9
Dinv14657 Davidia involucrata HOM05D001974 ORTHO05D001995 4.1e-19 97.4 58 81.0
HanXRQChr09g0260321 Helianthus annuus HOM05D001974 ORTHO05D001995 4.6e-18 94.0 58 77.6
PGR044G1896 Punica granatum HOM05D001974 ORTHO05D001995 5.9e-18 93.6 57 78.9
Cc10_g12500 Coffea canephora HOM05D001974 ORTHO05D001995 1.0e-17 92.8 58 77.6
Rhsim12G0081400 Rhododendron simsii HOM05D001974 ORTHO05D001995 1.0e-17 92.8 58 77.6
HanXRQChr09g0260301 Helianthus annuus HOM05D001974 ORTHO05D001995 1.3e-17 92.4 58 75.9
Actinidia15222 Actinidia chinensis HOM05D001974 ORTHO05D001995 2.3e-17 91.7 58 77.6
TAR625G0879 Trochodendron aralioides HOM05D001974 ORTHO05D001995 2.3e-17 91.7 58 79.3
Lj7A346T30 Lonicera japonica HOM05D001974 ORTHO05D001995 3.9e-17 90.9 58 75.9
QL09p033082 Quercus lobata HOM05D001974 ORTHO05D001995 3.9e-17 90.9 58 74.1
Phvul.009G128300 Phaseolus vulgaris HOM05D001974 ORTHO05D001995 5.0e-17 90.5 54 77.8
PGSC0003DMG400006048 Solanum tuberosum HOM05D001974 ORTHO05D001995 5.0e-17 90.5 58 77.6
Thecc.08G131200 Theobroma cacao HOM05D001974 ORTHO05D001995 5.0e-17 90.5 54 79.6
Cfa018109 Carpinus fangiana HOM05D001974 ORTHO05D001995 6.6e-17 90.1 54 79.6
DCAR_024514 Daucus carota HOM05D001974 ORTHO05D001995 8.6e-17 89.7 54 79.6
Manes.18G081400 Manihot esculenta HOM05D001974 ORTHO05D001995 8.6e-17 89.7 57 77.2
Nitab4.5_0006720g0010 Nicotiana tabacum HOM05D001974 ORTHO05D001995 8.6e-17 89.7 54 81.5
Solyc11g005080.1 Solanum lycopersicum HOM05D001974 ORTHO05D001995 1.1e-16 89.4 54 81.5
Lsat_1_v5_gn_4_74321 Lactuca sativa HOM05D001974 ORTHO05D001995 1.5e-16 89.0 58 74.1
Lj1g0025233 Lotus japonicus HOM05D001974 ORTHO05D001995 1.5e-16 89.0 54 77.8
THA.LOC104800217 Tarenaya hassleriana HOM05D001974 ORTHO05D001995 1.9e-16 88.6 58 74.1
TWI60G1213 Tripterygium wilfordii HOM05D001974 ORTHO05D001995 1.9e-16 88.6 58 70.7
Duzib093G2165 Durio zibethinus HOM05D001974 ORTHO05D001995 2.5e-16 88.2 54 77.8
VMungo1309G1905 Vigna mungo HOM05D001974 ORTHO05D001995 2.5e-16 88.2 54 75.9
CAN.G948.2 Capsicum annuum HOM05D001974 ORTHO05D001995 3.3e-16 87.8 54 79.6
ClCG08G005940 Citrullus lanatus HOM05D001974 ORTHO05D001995 3.3e-16 87.8 58 69.0
Nitab4.5_0000111g0080 Nicotiana tabacum HOM05D001974 ORTHO05D001995 3.3e-16 87.8 54 79.6
Cc10_g12490 Coffea canephora HOM05D001974 ORTHO05D001995 4.3e-16 87.4 58 74.1
Duzib116G0963 Durio zibethinus HOM05D001974 ORTHO05D001995 4.3e-16 87.4 54 77.8
Nn1g08899 Nelumbo nucifera HOM05D001974 ORTHO05D001995 4.3e-16 87.4 58 74.1
Oeu021881.1 Olea europaea HOM05D001974 ORTHO05D001995 4.3e-16 87.4 58 70.7
RcHm_v2.0_Chr6g0296441 Rosa chinensis HOM05D001974 ORTHO05D001995 4.3e-16 87.4 54 79.6
Sed0002798 Sechium edule HOM05D001974 ORTHO05D001995 4.3e-16 87.4 58 70.7
CARHR022030 Cardamine hirsuta HOM05D001974 ORTHO05D001995 5.6e-16 87.0 58 74.1
Eucgr.F04330 Eucalyptus grandis HOM05D001974 ORTHO05D001995 5.6e-16 87.0 54 74.1
BcaB07g32163 Brassica carinata HOM05D001974 ORTHO05D001995 7.3e-16 86.7 58 72.4
BcaB07g32164 Brassica carinata HOM05D001974 ORTHO05D001995 7.3e-16 86.7 58 72.4
Ciclev10000425m.g Citrus clementina HOM05D001974 ORTHO05D001995 7.3e-16 86.7 54 77.8
Thhalv10009943m.g Eutrema salsugineum HOM05D001974 ORTHO05D001995 7.3e-16 86.7 58 72.4
Sp1g19220 Schrenkiella parvula HOM05D001974 ORTHO05D001995 7.3e-16 86.7 58 72.4
Sopen11g001080 Solanum pennellii HOM05D001974 ORTHO05D001995 7.3e-16 86.7 54 79.6
Atru.chr13.1541 Acer truncatum HOM05D001974 ORTHO05D001995 9.5e-16 86.3 54 77.8
Haze_18005 Corylus avellana HOM05D001974 ORTHO05D001995 9.5e-16 86.3 54 79.6
ECA232G0613 Erigeron canadensis HOM05D001974 ORTHO05D001995 9.5e-16 86.3 58 72.4
Gohir.A02G071800 Gossypium hirsutum HOM05D001974 ORTHO05D001995 9.5e-16 86.3 54 77.8
Gohir.D02G079100 Gossypium hirsutum HOM05D001974 ORTHO05D001995 9.5e-16 86.3 54 77.8
Gorai.005G088400 Gossypium raimondii HOM05D001974 ORTHO05D001995 9.5e-16 86.3 54 77.8
TWI34G1097 Tripterygium wilfordii HOM05D001974 ORTHO05D001995 9.5e-16 86.3 58 69.0
Psat5g085400 Pisum sativum HOM05D001974 ORTHO05D001995 1.2e-15 85.9 54 75.9
A06p17760 Brassica napus HOM05D001974 ORTHO05D001995 1.6e-15 85.5 58 70.7
CsaV3_6G034160 Cucumis sativus L. HOM05D001974 ORTHO05D001995 1.6e-15 85.5 58 69.0
FvH4_2g27620 Fragaria vesca HOM05D001974 ORTHO05D001995 1.6e-15 85.5 58 72.4
FAN15G1949 Fragaria x ananassa HOM05D001974 ORTHO05D001995 1.6e-15 85.5 58 72.4
FAN20G0323 Fragaria x ananassa HOM05D001974 ORTHO05D001995 1.6e-15 85.5 58 72.4
Prupe.1G491500 Prunus persica HOM05D001974 ORTHO05D001995 1.6e-15 85.5 54 75.9
MELO3C010644.2 Cucumis melo HOM05D001974 ORTHO05D001995 2.1e-15 85.1 58 67.2
Migut.C01055 Erythranthe guttata HOM05D001974 ORTHO05D001995 2.1e-15 85.1 58 70.7
Glyma.06G116200 Glycine max HOM05D001974 ORTHO05D001995 2.1e-15 85.1 54 72.2
CiPaw.15G033300 Carya illinoinensis HOM05D001974 ORTHO05D001995 2.8e-15 84.7 58 72.4
Potri.002G079900 Populus trichocarpa HOM05D001974 ORTHO05D001995 2.8e-15 84.7 58 70.7
FAN24G0031 Fragaria x ananassa HOM05D001974 ORTHO05D001995 3.6e-15 84.3 58 72.4
MBI03_g46670_MAGBIO Magnolia biondii HOM05D001974 ORTHO05D001995 3.6e-15 84.3 58 70.7
Medtr3g088425 Medicago truncatula HOM05D001974 ORTHO05D001995 3.6e-15 84.3 54 74.1
EL10Ac3g06152 Beta vulgaris HOM05D001974 ORTHO05D001995 4.7e-15 84.0 57 71.9
CANSAT25G2198 Cannabis sativa HOM05D001974 ORTHO05D001995 4.7e-15 84.0 54 74.1
Cpa.g.sc64.135 Carica papaya HOM05D001974 ORTHO05D001995 4.7e-15 84.0 58 69.0
Peaxi162Scf00310g00420 Petunia axillaris HOM05D001974 ORTHO05D001995 4.7e-15 84.0 54 75.9
COL.COLO4_36247 Corchorus olitorius HOM05D001974 ORTHO05D001995 6.2e-15 83.6 54 77.8
AL1G34840 Arabidopsis lyrata HOM05D001974 ORTHO05D001995 8.0e-15 83.2 58 74.1
MSTRG.1420 Avicennia marina HOM05D001974 ORTHO05D001995 8.0e-15 83.2 57 73.7
Carub.0001s2111 Capsella rubella HOM05D001974 ORTHO05D001995 1.0e-14 82.8 58 70.7
Sabra02G0062500 Salix brachista HOM05D001974 ORTHO05D001995 1.8e-14 82.0 58 67.2
TPR.G13482 Trifolium pratense HOM05D001974 ORTHO05D001995 1.8e-14 82.0 54 74.1
Manes.18G081200 Manihot esculenta HOM05D001974 ORTHO05D001995 2.3e-14 81.6 57 70.2
arahy.Tifrunner.gnm1.ann1.IKMM6A Arachis hypogaea HOM05D001974 ORTHO05D001995 3.1e-14 81.3 57 71.9
CDE07G0829 Ceratophyllum demersum HOM05D001974 ORTHO05D001995 3.1e-14 81.3 58 67.2
Ca_16598_v3 Cicer arietinum L. HOM05D001974 ORTHO05D001995 3.1e-14 81.3 54 70.4
AT1G21680 Arabidopsis thaliana HOM05D001974 ORTHO05D001995 4.0e-14 80.9 58 72.4
Thhalv10006965m.g Eutrema salsugineum HOM05D001974 ORTHO05D001995 4.0e-14 80.9 58 65.5
BcaC05g26086 Brassica carinata HOM05D001974 ORTHO05D001995 5.2e-14 80.5 58 69.0
C05p20650 Brassica napus HOM05D001974 ORTHO05D001995 5.2e-14 80.5 58 69.0
BolC5t30764H Brassica oleracea HOM05D001974 ORTHO05D001995 5.2e-14 80.5 58 69.0
BraA06t24868Z Brassica rapa HOM05D001974 ORTHO05D001995 5.2e-14 80.5 58 69.0
Lalb_Chr11g0066111 Lupinus albus HOM05D001974 ORTHO05D001995 6.8e-14 80.1 54 74.1
unitig_8.g3914 Utricularia gibba HOM05D001974 ORTHO05D001995 6.8e-14 80.1 54 74.1
Aa31LG7G5650 Aethionema arabicum HOM05D001974 ORTHO05D001995 8.9e-14 79.7 58 69.0
SGA_v2.0_scaffold52G18932 Striga asiatica HOM05D001974 ORTHO05D001995 8.9e-14 79.7 58 69.0
BcaC05g26085 Brassica carinata HOM05D001974 ORTHO05D001995 1.2e-13 79.3 58 67.2
CARHR022020 Cardamine hirsuta HOM05D001974 ORTHO05D001995 1.5e-13 79.0 58 65.5
Ah.13g073230 Amaranthus hybridus HOM05D001974 ORTHO05D001995 2.0e-13 78.6 54 72.2
Aqoxy6G00335 Aquilegia oxysepala HOM05D001974 ORTHO05D001995 2.0e-13 78.6 58 63.8
AUR62002461 Chenopodium quinoa HOM05D001974 ORTHO05D001995 2.6e-13 78.2 58 67.2
BcaB07g32162 Brassica carinata HOM05D001974 ORTHO05D001995 3.4e-13 77.8 58 65.5
PSO528G0244 Papaver somniferum HOM05D001974 ORTHO05D001995 3.4e-13 77.8 58 63.8
THA.LOC104813673 Tarenaya hassleriana HOM05D001974 ORTHO05D001995 3.4e-13 77.8 58 67.2
C05p20640 Brassica napus HOM05D001974 ORTHO05D001995 4.4e-13 77.4 58 67.2
BolC5t30763H Brassica oleracea HOM05D001974 ORTHO05D001995 4.4e-13 77.4 58 67.2
AUR62023728 Chenopodium quinoa HOM05D001974 ORTHO05D001995 5.8e-13 77.0 58 67.2
SalBow7G3519 Salvia bowleyana HOM05D001974 ORTHO05D001995 1.3e-12 75.9 58 62.1
Sc15g0007540 Simmondsia chinensis HOM05D001974 ORTHO05D001995 1.7e-12 75.5 58 63.8
AL1G34830 Arabidopsis lyrata HOM05D001974 ORTHO05D001995 2.2e-12 75.1 58 63.8
Carub.0001s2110 Capsella rubella HOM05D001974 ORTHO05D001995 2.2e-12 75.1 58 63.8
MD15G1344100 Malus domestica HOM05D001974 ORTHO05D001995 2.2e-12 75.1 54 68.5
AT1G21670 Arabidopsis thaliana HOM05D001974 ORTHO05D001995 3.7e-12 74.3 58 62.1
A06p17750 Brassica napus HOM05D001974 ORTHO05D001995 3.7e-12 74.3 59 66.1
BraA06t24867Z Brassica rapa HOM05D001974 ORTHO05D001995 3.7e-12 74.3 59 66.1
HPP92_025165 Vanilla planifolia HOM05D001974 ORTHO05D001995 3.7e-12 74.3 58 65.5
HPP92_003125 Vanilla planifolia HOM05D001974 ORTHO05D001995 6.4e-12 73.6 58 65.5
Sp1g19210 Schrenkiella parvula HOM05D001974 ORTHO05D001995 3.2e-11 71.2 59 61.0
Os03g0840200 Oryza sativa ssp. japonica HOM05D001974 ORTHO05D001995 7.0e-11 70.1 54 64.8
Zm00001eb211030 Zea mays HOM05D001974 ORTHO05D001995 9.2e-11 69.7 59 64.4
unitig_699.g19767 Utricularia gibba HOM05D001974 ORTHO05D001995 1.2e-10 69.3 58 63.8
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 2.0e-10 68.6 56 57.1
Mapoly0073s0007 Marchantia polymorpha HOM05D001974 ORTHO05D001995 2.3e-09 65.1 54 59.3
SEGI_01346 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 4.3e-08 60.8 54 59.3
SEGI_38177 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 9.5e-08 59.7 58 53.4
CANSAT78G0278 Cannabis sativa HOM05D001974 ORTHO05D001995 2.8e-07 58.2 58 51.7
PSO729G0178 Papaver somniferum HOM05D001974 ORTHO05D001995 3.6e-07 57.8 61 49.2
SEGI_26948 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 3.6e-07 57.8 41 65.9
Actinidia21292 Actinidia chinensis HOM05D001974 ORTHO05D001995 4.7e-07 57.4 50 58.0
Pp3c1_690 Physcomitrium patens HOM05D001974 ORTHO05D001995 6.2e-07 57.0 58 48.3
Hund23182 Selenicereus undatus HOM05D001974 ORTHO05D001995 6.2e-07 57.0 54 57.4
SEGI_06668 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 8.1e-07 56.6 61 52.5
vmacro07880 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 1.4e-06 55.8 61 54.1
CSS0016587 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 1.8e-06 55.5 61 47.5
CANSAT78G2247 Cannabis sativa HOM05D001974 ORTHO05D001995 1.8e-06 55.5 58 48.3
DCAR_003580 Daucus carota HOM05D001974 ORTHO05D001995 1.8e-06 55.5 58 50.0
Manes.08G075525 Manihot esculenta HOM05D001974 ORTHO05D001995 1.8e-06 55.5 54 53.7
vmacro07881 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 1.8e-06 55.5 61 52.5
Ciclev10019102m.g Citrus clementina HOM05D001974 ORTHO05D001995 2.3e-06 55.1 58 46.6
Manes.08G075000 Manihot esculenta HOM05D001974 ORTHO05D001995 2.3e-06 55.1 54 53.7
Manes.08G075185 Manihot esculenta HOM05D001974 ORTHO05D001995 2.3e-06 55.1 54 53.7
CSS0034126 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 3.1e-06 54.7 61 47.5
CANSAT21G0707 Cannabis sativa HOM05D001974 ORTHO05D001995 3.1e-06 54.7 58 50.0
CANSAT21G2329 Cannabis sativa HOM05D001974 ORTHO05D001995 3.1e-06 54.7 58 50.0
Oeu008951.1 Olea europaea HOM05D001974 ORTHO05D043297 3.1e-06 54.7 43 65.1
CANSAT21G0298 Cannabis sativa HOM05D001974 ORTHO05D001995 4.0e-06 54.3 58 50.0
Mapoly0066s0120 Marchantia polymorpha HOM05D001974 ORTHO05D001995 4.0e-06 54.3 54 50.0
SalBow6G3361 Salvia bowleyana HOM05D001974 ORTHO05D001995 4.0e-06 54.3 54 51.9
SEGI_21775 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 4.0e-06 54.3 41 58.5
SEGI_29807 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 4.0e-06 54.3 41 58.5
SEGI_40556 Sequoiadendron giganteum HOM05D001974 ORTHO05D001995 4.0e-06 54.3 54 55.6
CSS0039191 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 5.2e-06 53.9 61 47.5
CSS0049093 Camellia sinensis var. sinensis HOM05D001974 ORTHO05D001995 5.2e-06 53.9 61 47.5
Hma1.2p1_0057F.1_g031980 Hydrangea macrophylla HOM05D001974 ORTHO05D001995 5.2e-06 53.9 58 50.0
Manes.08G074900 Manihot esculenta HOM05D001974 ORTHO05D001995 5.2e-06 53.9 54 50.0
PSO729G0134 Papaver somniferum HOM05D001974 ORTHO05D001995 5.2e-06 53.9 56 53.6
vmacro07850 Vaccinium macrocarpon HOM05D001974 ORTHO05D001995 5.2e-06 53.9 54 53.7
Manes.09G060824 Manihot esculenta HOM05D001974 ORTHO05D001995 6.8e-06 53.5 54 53.7
Os03g0403400 Oryza sativa ssp. japonica HOM05D001974 ORTHO05D001995 6.8e-06 53.5 54 51.9
PSO724G0115 Papaver somniferum HOM05D001974 ORTHO05D001995 6.8e-06 53.5 57 50.9
PSO724G0295 Papaver somniferum HOM05D001974 ORTHO05D001995 6.8e-06 53.5 56 50.0
CANSAT78G0362 Cannabis sativa HOM05D001974 ORTHO05D001995 8.9e-06 53.1 54 55.6
Hma1.2p1_1168F.1_g263050 Hydrangea macrophylla HOM05D001974 ORTHO05D001995 8.9e-06 53.1 58 48.3


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