Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041762 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 1.6e-103 379.4 187 100.0
CSS0022077 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 1.4e-70 270.0 192 77.6
CSS0029295 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D110613 1.8e-70 269.6 189 76.7
CSS0001394 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 1.0e-62 243.8 197 66.0
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-58 229.2 276 52.9
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.7e-55 218.4 276 51.8
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-53 213.0 270 51.5
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-53 212.6 276 51.1
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-43 180.3 262 48.5
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.6e-33 144.8 276 40.2
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-23 114.0 286 32.5
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.1e-22 109.4 279 32.3
Rhsim01G0226000 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.2e-19 97.8 111 48.6
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.4e-13 79.0 160 35.0
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.8e-13 78.6 160 35.6
FvH4_7g13761 Fragaria vesca HOM05D000045 ORTHO05D000067 9.9e-13 77.8 145 33.8
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-12 77.4 160 35.0
CSS0006298 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-12 76.3 142 36.6
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-12 76.3 142 36.6
CSS0047046 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-12 76.3 142 36.6
CSS0043688 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.4e-12 74.7 142 35.9
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-11 73.9 160 34.4
Atru.chr8.1689 Acer truncatum HOM05D000045 ORTHO05D000067 1.9e-11 73.6 141 34.8
Ciclev10003358m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.9e-11 73.6 140 35.0
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-11 73.2 160 33.8
TAR245G0006 Trochodendron aralioides HOM05D000045 ORTHO05D000067 3.2e-11 72.8 142 33.8
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.1e-11 71.6 201 32.3
Atru.chr3.3093 Acer truncatum HOM05D000045 ORTHO05D000067 1.2e-10 70.9 156 32.7
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-10 70.9 201 31.8
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-10 70.9 201 32.3
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-10 70.5 143 32.9
Psat5g221600 Pisum sativum HOM05D000045 ORTHO05D000067 2.1e-10 70.1 141 39.0
CSS0008641 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-10 69.7 160 33.1
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.7e-09 67.0 251 27.5
Ciclev10030312m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.1e-08 64.3 100 42.0
CSS0008128 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-08 63.5 123 34.1
Peaxi162Scf00106g00017 Petunia axillaris HOM05D000045 ORTHO05D000067 2.5e-08 63.2 143 32.2
CSS0024954 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.3e-08 62.8 123 34.1
TPR.G1463 Trifolium pratense HOM05D000045 ORTHO05D000067 3.3e-08 62.8 140 32.9
CSS0035044 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.3e-08 62.4 123 33.3
CSS0046621 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-07 60.1 123 32.5
Ciclev10013794m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.8e-07 59.7 102 37.3
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 3.6e-07 59.3 172 32.0
MBI12_g23370_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 4.7e-07 58.9 143 31.5
Atru.chr11.2219 Acer truncatum HOM05D000045 ORTHO05D000067 6.2e-07 58.5 143 30.1
FvH4_4g06832 Fragaria vesca HOM05D000045 ORTHO05D000067 8.1e-07 58.2 134 30.6
COL.COLO4_20853 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.8e-06 57.0 153 29.4
MBI19_g20574_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 1.8e-06 57.0 143 30.1
TWI73G0124 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-06 57.0 144 31.2
EL10Ac7g16467 Beta vulgaris HOM05D000045 ORTHO05D000067 2.4e-06 56.6 147 29.3
CSS0016254 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 2.4e-06 56.6 95 36.8
COL.COLO4_29562 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.1e-06 56.2 148 29.7
MBI19_g45010_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 3.1e-06 56.2 147 29.3
CSS0012445 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-06 55.8 235 26.0
EL10Ac1g01868 Beta vulgaris HOM05D000045 ORTHO05D000067 5.2e-06 55.5 150 28.7
TWI34G1161 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.2e-06 55.5 144 30.6
Thhalv10019760m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 6.8e-06 55.1 108 31.5
Atru.chr3.1377 Acer truncatum HOM05D000045 ORTHO05D004773 8.9e-06 54.7 143 29.4
TPR.G28050 Trifolium pratense HOM05D000045 ORTHO05D000001 8.9e-06 54.7 83 42.2


User provided reference genes

Program Settings