Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041738 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D011236 2.3e-111 405.6 207 100.0
CSS0016931 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D011236 3.4e-83 312.0 217 78.3
Actinidia19540 Actinidia chinensis HOM05D000520 ORTHO05D011236 1.2e-30 137.5 266 40.2
Sabra14G0106000 Salix brachista HOM05D000520 ORTHO05D011236 3.4e-22 109.4 239 36.4
Potri.014G140600 Populus trichocarpa HOM05D000520 ORTHO05D011236 1.9e-20 103.6 255 34.5
Dinv33258 Davidia involucrata HOM05D000520 ORTHO05D011236 7.8e-19 98.2 272 34.2
Haze_14991 Corylus avellana HOM05D000520 ORTHO05D011236 1.1e-15 87.8 269 33.8
TAR622G0348 Trochodendron aralioides HOM05D000520 ORTHO05D011236 3.4e-14 82.8 235 34.5
QL02p068120 Quercus lobata HOM05D000520 ORTHO05D011236 9.9e-14 81.3 265 30.2
GSVIVG01032941001 Vitis vinifera HOM05D000520 ORTHO05D011236 1.9e-12 77.0 271 33.9
Ciclev10018208m.g Citrus clementina HOM05D000520 ORTHO05D011236 3.2e-12 76.3 266 30.8
Atru.chr6.2740 Acer truncatum HOM05D000520 ORTHO05D011236 5.4e-12 75.5 267 32.2
arahy.Tifrunner.gnm1.ann1.XV7MNQ Arachis hypogaea HOM05D000520 ORTHO05D011236 6.6e-10 68.6 215 29.3
Glyma.16G150100 Glycine max HOM05D000520 ORTHO05D011236 1.6e-08 63.9 224 31.2
COL.COLO4_13411 Corchorus olitorius HOM05D000520 ORTHO05D011236 4.7e-08 62.4 252 31.0
arahy.Tifrunner.gnm1.ann1.0J4HUG Arachis hypogaea HOM05D000520 ORTHO05D011236 1.1e-07 61.2 224 27.2
Nn4g22054 Nelumbo nucifera HOM05D000520 ORTHO05D011236 1.1e-07 61.2 286 27.6
VMungo0464G1697 Vigna mungo HOM05D000520 ORTHO05D011236 3.1e-07 59.7 245 28.6
Eucgr.I01563 Eucalyptus grandis HOM05D000520 ORTHO05D011236 6.9e-07 58.5 286 27.6
TAR371G0511 Trochodendron aralioides HOM05D000520 ORTHO05D011236 1.2e-06 57.8 205 29.3
PGR142G0307 Punica granatum HOM05D000520 ORTHO05D011236 2.0e-06 57.0 259 28.2
Rhsim08G0037200 Rhododendron simsii HOM05D000520 ORTHO05D011236 2.6e-06 56.6 47 63.8
MBI07_g31503_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D011236 7.6e-06 55.1 269 29.0


User provided reference genes

Program Settings