Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041689 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 5.4e-140 501.1 278 100.0
CSS0045249 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.9e-108 396.4 289 74.7
CSS0023448 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.4e-92 343.6 271 67.9
CSS0038691 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.9e-77 292.7 156 92.3
CSS0043933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.6e-67 259.2 277 53.8
CSS0021727 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 5.0e-61 238.8 274 52.9
CSS0024032 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 8.5e-61 238.0 319 48.0
CSS0020511 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.9e-58 229.2 264 51.9
CSS0017543 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.0e-57 226.9 218 56.9
CSS0019933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.5e-53 211.8 267 47.2
CSS0044261 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.2e-45 186.8 331 39.6
CSS0017779 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 5.9e-38 162.2 300 37.3
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 3.3e-12 76.6 114 38.6
FAN25G3366 Fragaria x ananassa HOM05D016656 ORTHO05D015012 2.2e-08 63.9 118 33.9
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 2.2e-08 63.9 103 34.0
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 2.9e-08 63.5 103 34.0
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 2.9e-08 63.5 103 34.0
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.1e-07 61.6 103 29.1
FvH4_5g16044 Fragaria vesca HOM05D060084 ORTHO05D046536 1.4e-07 61.2 111 29.7
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 1.9e-07 60.8 99 31.3
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-07 60.1 189 24.9
RcHm_v2.0_Chr1g0321631 Rosa chinensis HOM05D008702 ORTHO05D003639 4.1e-07 59.7 100 31.0
RcHm_v2.0_Chr6g0263181 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-07 59.3 189 24.9
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 5.4e-07 59.3 166 28.3
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 7.1e-07 58.9 103 28.2
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 7.1e-07 58.9 189 24.9
RcHm_v2.0_Chr6g0253701 Rosa chinensis HOM05D008702 ORTHO05D003639 7.1e-07 58.9 189 24.9
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 3.5e-06 56.6 113 30.1
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 4.6e-06 56.2 162 32.7
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 6.0e-06 55.8 109 29.4
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 7.8e-06 55.5 108 34.3
vmacro08872 Vaccinium macrocarpon HOM05D000177 ORTHO05D004733 7.8e-06 55.5 188 27.1


User provided reference genes

Program Settings