Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.4e-73 278.9 156 100.0
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 7.1e-73 277.3 156 99.4
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.7e-26 123.2 170 55.9
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 1.7e-26 123.2 153 59.5
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.0e-26 121.7 170 54.7
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 3.6e-24 115.5 180 53.3
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 6.3e-21 104.8 153 53.6
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.4e-20 103.6 161 54.0
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 5.3e-20 101.7 145 48.3
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 9.1e-20 100.9 162 54.9
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 9.1e-20 100.9 161 52.2
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.5e-19 100.1 144 56.9
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 5.9e-19 98.2 151 53.6
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.7e-18 96.7 141 54.6
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 2.2e-18 96.3 163 51.5
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 2.9e-18 95.9 148 52.0
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 5.0e-18 95.1 135 54.1
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 6.5e-18 94.7 168 42.9
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 1.4e-17 93.6 147 51.0
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 2.5e-17 92.8 172 50.6
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 4.2e-17 92.0 157 51.6
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.6e-16 90.1 135 45.2
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 3.6e-16 89.0 166 49.4
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 1.0e-15 87.4 154 51.9
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 1.0e-15 87.4 164 50.0
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 1.0e-15 87.4 144 49.3
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.3e-15 86.3 136 50.0
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 3.0e-15 85.9 153 49.0
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 1.5e-14 83.6 165 46.7
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 7.4e-14 81.3 156 50.0
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 9.7e-14 80.9 139 48.9
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 9.7e-14 80.9 159 49.1
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 9.7e-14 80.9 159 49.1
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 9.7e-14 80.9 127 51.2
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 1.7e-13 80.1 165 41.8
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 2.8e-13 79.3 157 45.2
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 2.8e-13 79.3 159 47.8
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.8e-13 79.3 135 40.7
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 6.3e-13 78.2 156 48.7
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 1.8e-12 76.6 149 37.6
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.8e-12 76.6 139 48.9
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 4.1e-12 75.5 139 34.5
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 4.1e-12 75.5 124 42.7
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 7.0e-12 74.7 153 40.5
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 7.0e-12 74.7 135 38.5
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 9.1e-12 74.3 135 38.5
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 9.1e-12 74.3 135 47.4
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 9.1e-12 74.3 153 48.4
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 9.1e-12 74.3 133 37.6
Migut.H02240 Erythranthe guttata HOM05D008046 ORTHO05D004477 1.6e-11 73.6 154 46.8
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 2.0e-11 73.2 139 36.0
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 2.0e-11 73.2 156 43.6
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 2.6e-11 72.8 165 39.4
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 3.5e-11 72.4 172 43.0
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 3.5e-11 72.4 137 37.2
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 3.5e-11 72.4 157 42.7
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 4.5e-11 72.0 172 42.4
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 4.5e-11 72.0 172 42.4
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 5.9e-11 71.6 145 40.0
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 7.7e-11 71.2 152 37.5
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 1.0e-10 70.9 125 50.4
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 1.0e-10 70.9 172 44.2
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.3e-10 70.5 172 42.4
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 1.7e-10 70.1 151 43.0
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 1.7e-10 70.1 139 38.1
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 2.2e-10 69.7 142 37.3
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 2.2e-10 69.7 172 42.4
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 2.2e-10 69.7 163 41.1
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 2.2e-10 69.7 122 40.2
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 2.9e-10 69.3 127 44.9
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 3.8e-10 68.9 140 35.7
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 5.0e-10 68.6 171 40.9
PGSC0003DMG400017769 Solanum tuberosum HOM05D059644 ORTHO05D004477 5.0e-10 68.6 130 49.2
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 6.5e-10 68.2 127 35.4
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 6.5e-10 68.2 146 34.9
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 8.5e-10 67.8 130 47.7
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 8.5e-10 67.8 139 33.8
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 1.1e-09 67.4 137 40.1
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.9e-09 66.6 126 40.5
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.9e-09 66.6 144 44.4
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.9e-09 66.6 143 34.3
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.9e-09 66.6 139 33.1
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 2.5e-09 66.2 155 36.8
TPR.G6203 Trifolium pratense HOM05D008176 ORTHO05D004477 3.2e-09 65.9 142 34.5
Ca_16509_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 4.2e-09 65.5 149 32.9
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 4.2e-09 65.5 156 41.0
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 5.5e-09 65.1 145 39.3
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 7.2e-09 64.7 132 47.0
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 9.4e-09 64.3 136 41.9
Sopen04g029650 Solanum pennellii HOM05D010872 ORTHO05D013672 9.4e-09 64.3 155 42.6
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 1.2e-08 63.9 121 40.5
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 1.6e-08 63.5 172 37.8
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 1.6e-08 63.5 152 34.9
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 1.6e-08 63.5 132 44.7
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.1e-08 63.2 143 38.5
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 2.7e-08 62.8 128 39.1
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 2.7e-08 62.8 142 46.5
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 2.7e-08 62.8 154 35.7
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 2.7e-08 62.8 140 37.1
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 3.6e-08 62.4 136 36.0
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.6e-08 62.4 153 35.9
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 4.7e-08 62.0 156 36.5
ClCG11G014290 Citrullus lanatus HOM05D026294 ORTHO05D004477 6.1e-08 61.6 138 46.4
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 8.0e-08 61.2 128 49.2
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 8.0e-08 61.2 127 48.0
Gohir.D11G054500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.4e-07 60.5 157 34.4
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 1.8e-07 60.1 109 39.4
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.8e-07 60.1 116 36.2
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.8e-07 60.1 134 44.0
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 2.3e-07 59.7 41 65.9
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 3.0e-07 59.3 144 44.4
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 3.0e-07 59.3 143 35.7
Cpa.g.sc36.179 Carica papaya HOM05D008046 ORTHO05D004477 4.0e-07 58.9 152 42.8
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 4.0e-07 58.9 145 41.4
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 5.2e-07 58.5 127 44.1
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 5.2e-07 58.5 162 40.7
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 5.2e-07 58.5 141 35.5
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 6.7e-07 58.2 139 36.0
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 6.7e-07 58.2 142 34.5
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 6.7e-07 58.2 147 35.4
CDE03G0262 Ceratophyllum demersum HOM05D001201 ORTHO05D004477 8.8e-07 57.8 137 46.0
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 1.2e-06 57.4 127 41.7
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 1.2e-06 57.4 117 43.6
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 1.5e-06 57.0 146 39.0
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 1.5e-06 57.0 153 41.8
Lalb_Chr11g0075471 Lupinus albus HOM05D008176 ORTHO05D004477 2.0e-06 56.6 147 33.3
Gohir.A06G033600 Gossypium hirsutum HOM05D037684 ORTHO05D004477 2.6e-06 56.2 34 73.5
Gohir.D06G034500 Gossypium hirsutum HOM05D037684 ORTHO05D004477 2.6e-06 56.2 34 73.5
Gorai.010G038000 Gossypium raimondii HOM05D037684 ORTHO05D004477 2.6e-06 56.2 34 73.5
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 3.3e-06 55.8 136 34.6
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 3.3e-06 55.8 161 39.1
THA.LOC104816630 Tarenaya hassleriana HOM05D010872 ORTHO05D013672 4.4e-06 55.5 135 43.7
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 5.7e-06 55.1 105 38.1
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 7.5e-06 54.7 158 38.6
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 7.5e-06 54.7 129 33.3
Sed0027320 Sechium edule HOM05D026294 ORTHO05D004477 7.5e-06 54.7 130 44.6
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 7.5e-06 54.7 135 43.7
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 9.7e-06 54.3 162 33.3
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 9.7e-06 54.3 136 39.7
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 9.7e-06 54.3 163 33.1


User provided reference genes

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