Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041636 Camellia sinensis var. sinensis HOM05D046613 ORTHO05D000541 1.5e-66 256.1 134 100.0
CSS0013367 Camellia sinensis var. sinensis HOM05D046613 ORTHO05D000541 3.6e-41 171.8 138 73.9
CSS0015298 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 4.4e-31 138.3 143 62.2
CSS0049308 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 3.9e-27 125.2 139 56.8
CSS0022723 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 1.5e-23 113.2 134 54.5
CiPaw.03G160400 Carya illinoinensis HOM05D000727 ORTHO05D000541 3.9e-19 98.6 148 43.2
TAR626G1207 Trochodendron aralioides HOM05D001731 ORTHO05D004784 6.8e-16 87.8 148 41.9
PGR042G2804 Punica granatum HOM05D000727 ORTHO05D000541 7.6e-15 84.3 149 40.3
Nn1g07114 Nelumbo nucifera HOM05D000727 ORTHO05D000541 6.4e-14 81.3 143 42.7
Manes.12G074900 Manihot esculenta HOM05D000727 ORTHO05D000541 2.1e-12 76.3 153 40.5
Oeu041927.1 Olea europaea HOM05D000727 ORTHO05D000541 2.7e-12 75.9 149 43.6
Sed0014654 Sechium edule HOM05D000727 ORTHO05D000541 1.0e-11 73.9 153 36.6
CANSAT64G2837 Cannabis sativa HOM05D000727 ORTHO05D000541 2.3e-11 72.8 148 38.5
Cfa014412 Carpinus fangiana HOM05D000727 ORTHO05D000541 3.0e-11 72.4 151 37.7
MELO3C019265.2 Cucumis melo HOM05D000727 ORTHO05D000541 3.6e-09 65.5 151 35.1
Nitab4.5_0002137g0060 Nicotiana tabacum HOM05D000727 ORTHO05D000541 4.7e-09 65.1 118 35.6
Atru.chr6.3176 Acer truncatum HOM05D000727 ORTHO05D000541 3.1e-08 62.4 156 36.5
ClCG02G008680 Citrullus lanatus HOM05D000727 ORTHO05D000541 1.5e-07 60.1 135 36.3
MSTRG.984 Avicennia marina HOM05D000727 ORTHO05D000541 2.6e-07 59.3 127 38.6
Solyc02g082700.3 Solanum lycopersicum HOM05D000727 ORTHO05D000541 1.3e-06 57.0 138 37.7
Rhsim06G0161300 Rhododendron simsii HOM05D000727 ORTHO05D000541 3.8e-06 55.5 89 43.8
A03p48550 Brassica napus HOM05D000727 ORTHO05D000541 4.9e-06 55.1 142 36.6
Sc05g0007720 Simmondsia chinensis HOM05D000727 ORTHO05D000541 4.9e-06 55.1 141 34.0
CANSAT35G0903 Cannabis sativa HOM05D000727 ORTHO05D000541 6.4e-06 54.7 137 35.0


User provided reference genes

Program Settings