Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 9.3e-223 776.5 390 100.0
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 2.4e-138 496.1 408 66.4
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 2.5e-135 486.1 399 64.2
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 4.3e-127 458.8 389 64.5
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 6.8e-125 451.4 337 67.1
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 1.9e-114 416.8 366 58.7
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 2.4e-114 416.4 376 58.0
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 2.1e-110 403.3 356 59.3
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 2.1e-110 403.3 376 55.1
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 4.0e-109 399.1 365 57.8
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 6.9e-109 398.3 365 57.8
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 9.9e-108 394.4 375 55.7
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 1.3e-107 394.0 375 56.0
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 2.7e-105 386.3 398 51.8
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 1.8e-104 383.6 365 55.3
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 5.6e-103 378.6 366 54.9
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 1.3e-102 377.5 367 55.0
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 1.1e-101 374.4 367 54.8
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 3.1e-101 372.9 365 53.7
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 1.9e-98 363.6 373 53.4
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 2.9e-91 339.7 368 48.6
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 3.8e-91 339.3 368 48.4
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 2.5e-79 300.1 366 45.6
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 7.4e-71 271.9 258 57.0
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 4.5e-68 262.7 232 62.1
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 1.8e-64 250.8 371 36.4
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 2.0e-63 247.3 384 37.2
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 1.5e-58 231.1 259 46.3
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 5.7e-47 192.6 279 36.6
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 7.7e-44 182.2 200 44.5
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 1.5e-34 151.4 368 30.7
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 1.9e-34 151.0 145 56.6
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 2.1e-33 147.5 365 29.9
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 2.3e-32 144.1 365 28.8
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 1.2e-31 141.7 368 28.8
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 1.6e-28 131.3 303 29.4
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 1.6e-28 131.3 91 67.0
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.2e-23 115.2 321 25.5
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.7e-22 111.3 267 29.2
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 3.9e-19 100.1 311 24.4
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 2.1e-17 94.4 96 47.9
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 2.6e-15 87.4 105 39.0
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 3.3e-10 70.5 62 50.0
ATR0168G001 Amborella trichopoda HOM05D008798 ORTHO05D011016 5.8e-07 59.7 59 47.5


User provided reference genes

Program Settings