Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 9.4e-223 776.5 395 100.0
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.1e-218 763.1 395 98.0
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.4e-173 612.5 395 78.2
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 4.9e-171 604.7 395 77.0
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 9.2e-170 600.5 395 77.0
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 3.5e-161 572.0 394 73.4
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.4e-157 559.3 372 76.3
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 1.3e-147 526.9 394 66.5
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 2.4e-146 522.7 395 65.8
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.1e-145 519.6 394 66.2
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.3e-144 516.2 394 64.2
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 8.4e-139 497.7 394 63.7
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 4.2e-138 495.4 392 62.8
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 9.3e-138 494.2 389 64.3
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 2.1e-137 493.0 392 62.8
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 1.3e-136 490.3 392 62.8
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 3.7e-134 482.3 394 59.6
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 4.8e-134 481.9 391 63.4
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.8e-133 479.9 393 61.1
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 5.3e-133 478.4 389 61.2
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 5.3e-133 478.4 391 62.9
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 9.0e-133 477.6 391 62.9
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.4e-132 475.7 393 60.6
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 4.5e-132 475.3 386 65.0
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 7.6e-132 474.6 393 60.3
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 7.6e-132 474.6 392 59.4
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.3e-131 473.8 393 60.8
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 2.9e-131 472.6 403 59.8
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.9e-131 472.6 394 58.6
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.1e-130 470.7 393 60.3
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 1.4e-130 470.3 392 60.7
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 2.5e-130 469.5 389 61.2
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 9.4e-130 467.6 393 60.1
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 2.7e-129 466.1 392 62.2
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 3.6e-129 465.7 376 62.0
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 6.1e-129 464.9 392 57.9
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.0e-128 464.2 389 61.4
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.5e-127 460.3 394 60.4
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 7.4e-127 458.0 392 59.9
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.7e-126 456.8 393 58.8
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.2e-126 456.4 392 60.7
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 2.2e-126 456.4 394 59.1
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 6.3e-126 454.9 393 59.3
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 2.0e-124 449.9 353 64.9
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 1.0e-123 447.6 397 55.9
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.7e-123 446.8 393 55.5
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 2.2e-123 446.4 389 59.4
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 2.2e-123 446.4 389 55.3
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 3.8e-123 445.7 393 56.7
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 5.0e-123 445.3 394 56.1
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 6.5e-123 444.9 393 55.2
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 1.1e-122 444.1 392 57.9
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 1.6e-121 440.3 394 59.1
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.0e-120 437.6 393 56.0
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 2.3e-120 436.4 394 56.3
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 6.7e-120 434.9 388 58.5
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 8.8e-120 434.5 399 58.4
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 1.5e-119 433.7 395 55.2
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.0e-119 433.3 394 54.3
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 9.7e-119 431.0 396 56.6
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 3.7e-118 429.1 394 53.8
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 3.7e-118 429.1 394 54.1
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 9.1e-117 424.5 395 53.7
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 9.1e-117 424.5 391 52.9
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.2e-116 424.1 393 54.5
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.0e-115 421.0 391 53.5
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.3e-115 420.6 391 55.2
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 1.3e-115 420.6 392 53.3
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 4.2e-114 415.6 392 53.1
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 5.5e-114 415.2 388 53.6
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 5.5e-114 415.2 386 57.0
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 7.2e-114 414.8 395 54.7
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 3.6e-113 412.5 389 56.3
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 8.0e-113 411.4 389 52.4
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 5.2e-112 408.7 389 54.0
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 6.7e-112 408.3 397 53.9
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 6.7e-112 408.3 392 52.6
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 1.5e-111 407.1 393 53.2
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 2.0e-111 406.8 310 69.0
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 1.7e-110 403.7 389 54.2
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 3.1e-109 399.4 396 53.5
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 2.6e-108 396.4 399 52.6
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 4.5e-108 395.6 398 52.5
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 5.0e-107 392.1 395 52.9
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 1.5e-106 390.6 416 50.2
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 1.5e-106 390.6 394 50.8
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.9e-106 390.2 389 52.2
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 6.1e-105 385.2 402 50.2
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 8.0e-105 384.8 389 49.4
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 3.0e-104 382.9 389 48.6
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 6.7e-104 381.7 392 51.0
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 8.8e-104 381.3 417 48.7
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 1.2e-103 380.9 394 51.0
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 3.3e-103 379.4 402 49.5
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.3e-102 377.5 416 46.6
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.3e-102 377.5 416 46.6
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 6.3e-102 375.2 400 51.5
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 1.4e-101 374.0 393 49.9
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 2.4e-101 373.2 396 48.7
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 3.1e-101 372.9 416 45.9
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 7.0e-101 371.7 265 69.4
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 2.2e-99 366.7 397 48.4
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 2.9e-99 366.3 315 61.6
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 3.2e-98 362.8 394 49.0
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 1.0e-96 357.8 418 46.2
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 8.8e-96 354.8 391 47.8
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.0e-93 345.1 391 47.6
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.6e-92 344.0 271 63.5
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 7.7e-92 341.7 387 45.5
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 1.9e-90 337.0 331 53.2
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 2.3e-80 303.5 311 49.5
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 3.4e-79 299.7 182 83.0
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 3.5e-68 263.1 422 40.3
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 9.3e-45 185.3 247 38.9
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 7.3e-42 175.6 311 40.2
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.5e-39 166.4 431 32.7
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 6.0e-36 156.0 201 37.8
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 6.0e-36 156.0 226 34.5
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.9e-34 151.0 343 30.6
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 6.4e-30 136.0 246 37.4
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 3.2e-29 133.7 180 48.9
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.6e-28 131.3 367 28.3
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.6e-28 131.3 367 28.3
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 1.3e-25 121.7 389 27.0
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 1.3e-25 121.7 181 44.8
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 9.0e-24 115.5 375 24.8
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 1.2e-23 115.2 369 25.5
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 6.7e-19 99.4 118 43.2
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 9.7e-18 95.5 374 25.1
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 3.9e-11 73.6 278 26.6
Dinv09820 Davidia involucrata HOM05D000025 ORTHO05D000450 4.8e-09 66.6 47 76.6


User provided reference genes

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