Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041592 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 7.5e-142 507.3 278 100.0
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 2.3e-29 133.7 200 45.0
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 2.3e-29 133.7 206 47.1
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 2.0e-25 120.6 183 47.5
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 1.3e-24 117.9 174 50.0
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 3.9e-21 106.3 202 39.6
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 2.3e-18 97.1 195 36.9
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 8.9e-18 95.1 174 43.1
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 5.8e-17 92.4 153 43.1
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 1.6e-14 84.3 233 39.9
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 7.3e-12 75.5 145 37.9
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-11 72.8 215 26.5
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 6.2e-11 72.4 175 33.1
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 1.8e-10 70.9 176 32.4
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 3.1e-10 70.1 174 36.2
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-10 69.7 115 39.1
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 1.5e-09 67.8 212 39.2
CSS0004115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-09 67.0 154 32.5
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-09 67.0 220 25.9
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.8e-09 65.1 109 35.8
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 1.7e-08 64.3 162 33.3
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 1.7e-08 64.3 202 31.2
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 2.2e-08 63.9 170 32.4
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-08 62.0 48 62.5
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 8.3e-08 62.0 166 32.5
QL09p032547 Quercus lobata HOM05D001245 ORTHO05D004475 1.1e-07 61.6 89 36.0
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 3.2e-07 60.1 243 33.7
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 3.2e-07 60.1 147 32.7
CSS0011592 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-07 59.7 116 37.1
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 4.1e-07 59.7 137 35.0
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 5.4e-07 59.3 139 38.8
CSS0016147 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 7.1e-07 58.9 36 77.8
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-07 58.5 49 57.1
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 1.2e-06 58.2 36 66.7
CSS0040614 Camellia sinensis var. sinensis HOM05D019333 ORTHO05D000004 1.2e-06 58.2 79 44.3
CSS0015726 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-06 57.8 204 23.5
CSS0000411 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 2.1e-06 57.4 77 41.6
CSS0013093 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 2.1e-06 57.4 77 41.6
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 2.1e-06 57.4 47 53.2
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 2.1e-06 57.4 167 37.7
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 2.1e-06 57.4 169 34.9
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 4.6e-06 56.2 165 35.2
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 4.6e-06 56.2 165 35.2
Rhsim03G0037200 Rhododendron simsii HOM05D000611 ORTHO05D004334 6.0e-06 55.8 157 29.9


User provided reference genes

Program Settings