Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041575 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 3.8e-32 141.0 75 100.0
CSS0047787 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 2.3e-29 131.7 75 93.3
Actinidia33394 Actinidia chinensis HOM05D005435 ORTHO05D007370 4.1e-10 67.8 39 94.9
CSS0000486 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 9.1e-10 66.6 39 94.9
vmacro16401 Vaccinium macrocarpon HOM05D005435 ORTHO05D007370 7.7e-09 63.5 39 87.2
Dinv03347 Davidia involucrata HOM05D005435 ORTHO05D007370 1.3e-08 62.8 45 75.6
Dinv29103 Davidia involucrata HOM05D005435 ORTHO05D007370 1.3e-08 62.8 39 87.2
Rhsim12G0137200 Rhododendron simsii HOM05D005435 ORTHO05D007370 1.7e-08 62.4 39 84.6
Cc06_g19340 Coffea canephora HOM05D005435 ORTHO05D007370 3.8e-08 61.2 39 84.6
SGA_v2.0_scaffold105G30289 Striga asiatica HOM05D005435 ORTHO05D007370 8.5e-08 60.1 39 76.9
AUR62014241 Chenopodium quinoa HOM05D005435 ORTHO05D007370 2.5e-07 58.5 39 79.5
Migut.J01655 Erythranthe guttata HOM05D005435 ORTHO05D007370 2.5e-07 58.5 39 76.9
Lj3C986G3 Lonicera japonica HOM05D005435 ORTHO05D007370 2.5e-07 58.5 39 79.5
EL10Ac7g16635 Beta vulgaris HOM05D005435 ORTHO05D007370 4.2e-07 57.8 39 76.9
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 5.5e-07 57.4 39 76.9
Thecc.05G067100 Theobroma cacao HOM05D005435 ORTHO05D007370 5.5e-07 57.4 39 79.5
CiPaw.09G172100 Carya illinoinensis HOM05D005435 ORTHO05D007370 7.2e-07 57.0 39 76.9
AUR62038499 Chenopodium quinoa HOM05D005435 ORTHO05D007370 7.2e-07 57.0 39 76.9
Gohir.A01G141700 Gossypium hirsutum HOM05D005435 ORTHO05D007370 9.4e-07 56.6 39 79.5
Gohir.D01G130500 Gossypium hirsutum HOM05D005435 ORTHO05D007370 9.4e-07 56.6 39 79.5
Gorai.002G161900 Gossypium raimondii HOM05D005435 ORTHO05D007370 9.4e-07 56.6 39 79.5
QL07p043246 Quercus lobata HOM05D005435 ORTHO05D007370 9.4e-07 56.6 36 80.6
Manes.09G066100 Manihot esculenta HOM05D005435 ORTHO05D007370 1.2e-06 56.2 40 72.5
MD12G1112900 Malus domestica HOM05D005435 ORTHO05D007370 2.1e-06 55.5 39 74.4
Prupe.6G232000 Prunus persica HOM05D005435 ORTHO05D007370 2.1e-06 55.5 39 74.4
HanXRQChr03g0082591 Helianthus annuus HOM05D000338 ORTHO05D000698 2.7e-06 55.1 62 50.0
MD04G1093200 Malus domestica HOM05D005435 ORTHO05D007370 2.7e-06 55.1 39 71.8
Manes.08G010700 Manihot esculenta HOM05D005435 ORTHO05D007370 2.7e-06 55.1 39 71.8
MSTRG.10790 Avicennia marina HOM05D005435 ORTHO05D007370 4.7e-06 54.3 36 72.2
SalBow6G0607 Salvia bowleyana HOM05D005435 ORTHO05D007370 4.7e-06 54.3 51 58.8
Cpa.g.c35476 Carica papaya HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 71.8
Cpa.g.sc738.3 Carica papaya HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 71.8
Cfa017616 Carpinus fangiana HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 71.8
Lj1g0010500 Lotus japonicus HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 74.4
PSO063G1591 Papaver somniferum HOM05D005435 ORTHO05D007370 6.1e-06 53.9 51 60.8
Sed0000088 Sechium edule HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 71.8
TPR.G32806 Trifolium pratense HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 69.2
TAR633G1880 Trochodendron aralioides HOM05D005435 ORTHO05D007370 6.1e-06 53.9 39 71.8
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea HOM05D005435 ORTHO05D007370 8.0e-06 53.5 51 58.8
Medtr7g101940 Medicago truncatula HOM05D005435 ORTHO05D007370 8.0e-06 53.5 39 69.2


User provided reference genes

Program Settings