Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041569 Camellia sinensis var. sinensis HOM05D046900 ORTHO05D003092 1.1e-267 926.0 459 100.0
CSS0035862 Camellia sinensis var. sinensis HOM05D046900 ORTHO05D003092 5.0e-260 900.6 459 97.8
Dinv41472 Davidia involucrata HOM05D003107 ORTHO05D003092 3.0e-103 379.8 437 51.9
Actinidia07321 Actinidia chinensis HOM05D003107 ORTHO05D003092 6.7e-87 325.5 379 51.2
Rhsim01G0061100 Rhododendron simsii HOM05D003107 ORTHO05D003092 3.8e-74 283.1 403 45.9
TAR636G3294 Trochodendron aralioides HOM05D003107 ORTHO05D003092 2.1e-56 224.2 451 38.6
Nitab4.5_0003393g0030 Nicotiana tabacum HOM05D009561 ORTHO05D003092 8.6e-26 122.5 409 31.8
GSVIVG01015599001 Vitis vinifera HOM05D003107 ORTHO05D003092 2.0e-22 111.3 203 43.3
CAN.G763.8 Capsicum annuum HOM05D009561 ORTHO05D003092 7.0e-20 102.8 422 30.8
Nitab4.5_0000374g0130 Nicotiana tabacum HOM05D009561 ORTHO05D003092 1.6e-19 101.7 407 29.7
Nn8g39562 Nelumbo nucifera HOM05D003107 ORTHO05D003092 1.2e-16 92.0 412 27.9
QL02p089967 Quercus lobata HOM05D003107 ORTHO05D003092 3.6e-16 90.5 424 27.4
Potri.018G125500 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.4e-12 78.6 125 44.8
Potri.T125307 Populus trichocarpa HOM05D003107 ORTHO05D003092 1.4e-12 78.6 125 44.8
Sabra18G0106800 Salix brachista HOM05D003107 ORTHO05D003092 4.1e-12 77.0 135 42.2
Manes.06G046500 Manihot esculenta HOM05D003107 ORTHO05D003092 9.2e-12 75.9 167 37.7
PGSC0003DMG400006706 Solanum tuberosum HOM05D009561 ORTHO05D003092 4.6e-11 73.6 416 27.9
Peaxi162Scf00088g01216 Petunia axillaris HOM05D009561 ORTHO05D003092 1.0e-10 72.4 224 32.1
Aqoxy7G03629 Aquilegia oxysepala HOM05D003107 ORTHO05D003092 3.9e-10 70.5 403 23.3
Haze_25497 Corylus avellana HOM05D003107 ORTHO05D003092 3.3e-09 67.4 217 31.3
Cfa002924 Carpinus fangiana HOM05D003107 ORTHO05D003092 1.6e-08 65.1 171 35.7
Sopen07g003740 Solanum pennellii HOM05D009561 ORTHO05D003092 1.8e-07 61.6 429 25.4
Sc18g0000310 Simmondsia chinensis HOM05D003107 ORTHO05D003092 5.2e-07 60.1 405 25.7


User provided reference genes

Program Settings