Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041548 Camellia sinensis var. sinensis HOM05D002187 ORTHO05D002243 2.6e-26 121.3 62 100.0
CSS0031826 Camellia sinensis var. sinensis HOM05D002187 ORTHO05D002243 1.9e-21 105.1 60 90.0
TAR622G0938 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.4e-19 99.0 60 81.7
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 4.0e-19 97.4 58 82.8
DCAR_032010 Daucus carota HOM05D002187 ORTHO05D002243 5.2e-19 97.1 58 81.0
DCAR_032011 Daucus carota HOM05D002187 ORTHO05D002243 5.2e-19 97.1 58 81.0
CSS0022441 Camellia sinensis var. sinensis HOM05D002187 ORTHO05D002243 8.9e-19 96.3 60 80.0
CSS0041289 Camellia sinensis var. sinensis HOM05D002187 ORTHO05D002243 1.2e-18 95.9 57 82.5
Lalb_Chr11g0063441 Lupinus albus HOM05D002187 ORTHO05D002243 2.6e-18 94.7 58 79.3
Dinv34872 Davidia involucrata HOM05D002187 ORTHO05D002243 3.4e-18 94.4 60 78.3
Atru.chr7.2605 Acer truncatum HOM05D002187 ORTHO05D002243 4.4e-18 94.0 58 77.6
Hma1.2p1_0588F.1_g184435 Hydrangea macrophylla HOM05D002187 ORTHO05D002243 4.4e-18 94.0 58 77.6
MBI15_g22710_MAGBIO Magnolia biondii HOM05D002187 ORTHO05D002243 4.4e-18 94.0 57 80.7
Oeu014157.2 Olea europaea HOM05D002187 ORTHO05D002243 4.4e-18 94.0 60 78.3
VMungo1309G0795 Vigna mungo HOM05D002187 ORTHO05D002243 4.4e-18 94.0 60 78.3
arahy.Tifrunner.gnm1.ann1.MVX6LJ Arachis hypogaea HOM05D002187 ORTHO05D002243 5.8e-18 93.6 58 79.3
arahy.Tifrunner.gnm1.ann1.Z7V5PV Arachis hypogaea HOM05D002187 ORTHO05D002243 5.8e-18 93.6 58 79.3
Glyma.04G058600 Glycine max HOM05D002187 ORTHO05D002243 9.8e-18 92.8 60 78.3
Peaxi162Scf00045g01833 Petunia axillaris HOM05D002187 ORTHO05D002243 9.8e-18 92.8 60 75.0
SGA_v2.0_scaffold193G40698 Striga asiatica HOM05D002187 ORTHO05D002243 9.8e-18 92.8 57 77.2
Cc08_g06340 Coffea canephora HOM05D002187 ORTHO05D002243 1.3e-17 92.4 60 76.7
Nitab4.5_0000989g0040 Nicotiana tabacum HOM05D002187 ORTHO05D002243 1.3e-17 92.4 58 75.9
Nitab4.5_0003933g0020 Nicotiana tabacum HOM05D002187 ORTHO05D002243 1.3e-17 92.4 58 75.9
Lj7A742T21 Lonicera japonica HOM05D002187 ORTHO05D002243 1.7e-17 92.0 59 74.6
Oeu019794.2 Olea europaea HOM05D002187 ORTHO05D002243 2.2e-17 91.7 58 77.6
Sed0019319 Sechium edule HOM05D002187 ORTHO05D002243 2.2e-17 91.7 57 78.9
Actinidia06442 Actinidia chinensis HOM05D002187 ORTHO05D002243 3.7e-17 90.9 58 77.6
Actinidia36295 Actinidia chinensis HOM05D002187 ORTHO05D002243 3.7e-17 90.9 60 73.3
Nn4g23625 Nelumbo nucifera HOM05D002187 ORTHO05D002243 3.7e-17 90.9 57 78.9
Sabra18G0017300 Salix brachista HOM05D002187 ORTHO05D002243 3.7e-17 90.9 60 73.3
Sed0019494 Sechium edule HOM05D002187 ORTHO05D002243 3.7e-17 90.9 58 75.9
Solyc08g006510.3 Solanum lycopersicum HOM05D002187 ORTHO05D002243 3.7e-17 90.9 60 73.3
Sopen08g002470 Solanum pennellii HOM05D002187 ORTHO05D002243 3.7e-17 90.9 60 73.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 4.9e-17 90.5 57 77.2
ECA233G0933 Erigeron canadensis HOM05D002187 ORTHO05D002243 4.9e-17 90.5 57 77.2
Migut.A00404 Erythranthe guttata HOM05D002187 ORTHO05D002243 4.9e-17 90.5 57 75.4
Gohir.A05G062800 Gossypium hirsutum HOM05D002187 ORTHO05D002243 4.9e-17 90.5 58 75.9
Gohir.A05G062866 Gossypium hirsutum HOM05D002187 ORTHO05D002243 4.9e-17 90.5 58 75.9
Gohir.D05G065300 Gossypium hirsutum HOM05D002187 ORTHO05D002243 4.9e-17 90.5 58 75.9
Gorai.009G066100 Gossypium raimondii HOM05D002187 ORTHO05D002243 4.9e-17 90.5 58 75.9
Manes.16G133500 Manihot esculenta HOM05D002187 ORTHO05D002243 4.9e-17 90.5 58 74.1
THA.LOC104814977 Tarenaya hassleriana HOM05D002187 ORTHO05D002243 4.9e-17 90.5 58 77.6
AL6G21270 Arabidopsis lyrata HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
AT5G10730 Arabidopsis thaliana HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
EL10Ac2g02433 Beta vulgaris HOM05D002187 ORTHO05D002243 6.4e-17 90.1 57 77.2
BcaB05g21501 Brassica carinata HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
BcaC03g13327 Brassica carinata HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
A02p00620 Brassica napus HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
A10p26870 Brassica napus HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
C02p04610 Brassica napus HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
C09p66040 Brassica napus HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
BolC2t06421H Brassica oleracea HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
BraA02t05045Z Brassica rapa HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
BraA10t44740Z Brassica rapa HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
Carub.0006s0920 Capsella rubella HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
CARHR202590 Cardamine hirsuta HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
Lalb_Chr08g0244591 Lupinus albus HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 74.1
Rhsim10G0066000 Rhododendron simsii HOM05D002187 ORTHO05D002243 6.4e-17 90.1 60 73.3
Sp6g32730 Schrenkiella parvula HOM05D002187 ORTHO05D002243 6.4e-17 90.1 58 77.6
Sc09g0010820 Simmondsia chinensis HOM05D002187 ORTHO05D002243 8.3e-17 89.7 57 78.9
GSVIVG01036044001 Vitis vinifera HOM05D002187 ORTHO05D002243 8.3e-17 89.7 60 76.7
CAN.G396.12 Capsicum annuum HOM05D002187 ORTHO05D002243 1.1e-16 89.4 60 71.7
Eucgr.C01875 Eucalyptus grandis HOM05D002187 ORTHO05D002243 1.1e-16 89.4 57 73.7
HanXRQChr05g0135621 Helianthus annuus HOM05D002187 ORTHO05D002243 1.1e-16 89.4 57 75.4
CDE04G0777 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.4e-16 89.0 57 75.4
AUR62020302 Chenopodium quinoa HOM05D002187 ORTHO05D002243 1.4e-16 89.0 57 77.2
AUR62037697 Chenopodium quinoa HOM05D002187 ORTHO05D002243 1.4e-16 89.0 57 77.2
BcaB08g37313 Brassica carinata HOM05D002187 ORTHO05D002243 1.9e-16 88.6 58 75.9
COL.COLO4_19002 Corchorus olitorius HOM05D002187 ORTHO05D002243 1.9e-16 88.6 58 74.1
Aa31LG3G16380 Aethionema arabicum HOM05D002187 ORTHO05D002243 2.4e-16 88.2 58 75.9
BcaC04g19289 Brassica carinata HOM05D002187 ORTHO05D002243 2.4e-16 88.2 58 75.9
Duzib187G1650 Durio zibethinus HOM05D002187 ORTHO05D002243 2.4e-16 88.2 58 74.1
TWI63G1524 Tripterygium wilfordii HOM05D002187 ORTHO05D002243 2.4e-16 88.2 58 77.6
Ca_15795_v3 Cicer arietinum L. HOM05D002187 ORTHO05D002243 3.2e-16 87.8 58 74.1
ECA240G0785 Erigeron canadensis HOM05D002187 ORTHO05D002243 3.2e-16 87.8 58 70.7
PGR083G2273 Punica granatum HOM05D002187 ORTHO05D002243 3.2e-16 87.8 58 72.4
ClCG08G013880 Citrullus lanatus HOM05D002187 ORTHO05D002243 4.1e-16 87.4 58 72.4
CsaV3_2G032660 Cucumis sativus L. HOM05D002187 ORTHO05D002243 4.1e-16 87.4 58 72.4
Potri.006G268000 Populus trichocarpa HOM05D002187 ORTHO05D002243 4.1e-16 87.4 57 73.7
Thecc.09G010800 Theobroma cacao HOM05D002187 ORTHO05D002243 4.1e-16 87.4 58 70.7
MELO3C011320.2 Cucumis melo HOM05D002187 ORTHO05D002243 5.4e-16 87.0 58 70.7
Phvul.009G085100 Phaseolus vulgaris HOM05D002187 ORTHO05D002243 5.4e-16 87.0 60 71.7
Cpa.g.sc23.47 Carica papaya HOM05D002187 ORTHO05D002243 7.0e-16 86.7 58 70.7
Haze_21358 Corylus avellana HOM05D002187 ORTHO05D002243 7.0e-16 86.7 58 75.9
Haze_21364 Corylus avellana HOM05D002187 ORTHO05D002243 7.0e-16 86.7 58 75.9
TPR.G6775 Trifolium pratense HOM05D002187 ORTHO05D002243 7.0e-16 86.7 58 74.1
vmacro05593 Vaccinium macrocarpon HOM05D002187 ORTHO05D002243 7.0e-16 86.7 60 68.3
Ciclev10009111m.g Citrus clementina HOM05D002187 ORTHO05D002243 9.2e-16 86.3 56 75.0
Thhalv10014285m.g Eutrema salsugineum HOM05D002187 ORTHO05D002243 9.2e-16 86.3 58 72.4
Lsat_1_v5_gn_6_15660 Lactuca sativa HOM05D002187 ORTHO05D002243 9.2e-16 86.3 57 71.9
Nitab4.5_0000502g0190 Nicotiana tabacum HOM05D002187 ORTHO05D002243 9.2e-16 86.3 60 68.3
Lj1g0003178 Lotus japonicus HOM05D002187 ORTHO05D002243 1.2e-15 85.9 56 73.2
Os02g0556100 Oryza sativa ssp. japonica HOM05D002187 ORTHO05D002243 1.6e-15 85.5 57 73.7
Aqoxy3G03813 Aquilegia oxysepala HOM05D002187 ORTHO05D002243 2.0e-15 85.1 55 74.5
Lsat_1_v5_gn_5_62121 Lactuca sativa HOM05D002187 ORTHO05D002243 2.0e-15 85.1 58 69.0
Potri.018G013400 Populus trichocarpa HOM05D002187 ORTHO05D002243 2.0e-15 85.1 56 76.8
SalBow4G2070 Salvia bowleyana HOM05D002187 ORTHO05D002243 2.7e-15 84.7 56 75.0
MSTRG.25813 Avicennia marina HOM05D002187 ORTHO05D002243 3.5e-15 84.3 57 71.9
Thecc.04G145200 Theobroma cacao HOM05D002187 ORTHO05D002243 3.5e-15 84.3 60 70.0
CiPaw.07G234000 Carya illinoinensis HOM05D002187 ORTHO05D002243 4.6e-15 84.0 58 72.4
Duzib150G1169 Durio zibethinus HOM05D002187 ORTHO05D002243 4.6e-15 84.0 58 70.7
Duzib168G0778 Durio zibethinus HOM05D002187 ORTHO05D002243 4.6e-15 84.0 54 75.9
HanXRQChr13g0412511 Helianthus annuus HOM05D002187 ORTHO05D002243 4.6e-15 84.0 57 70.2
Medtr3g105660 Medicago truncatula HOM05D002187 ORTHO05D002243 4.6e-15 84.0 58 72.4
Potri.004G106300 Populus trichocarpa HOM05D002187 ORTHO05D002243 6.0e-15 83.6 56 69.6
QL02p017682 Quercus lobata HOM05D002187 ORTHO05D002243 6.0e-15 83.6 59 71.2
ATR0691G165 Amborella trichopoda HOM05D002187 ORTHO05D002243 1.0e-14 82.8 56 66.1
PSO017G1282 Papaver somniferum HOM05D002187 ORTHO05D002243 1.3e-14 82.4 57 70.2
PSO478G3368 Papaver somniferum HOM05D002187 ORTHO05D002243 1.3e-14 82.4 57 70.2
RcHm_v2.0_Chr6g0299041 Rosa chinensis HOM05D002187 ORTHO05D002243 1.3e-14 82.4 58 65.5
Psat0s4637g0040 Pisum sativum HOM05D002187 ORTHO05D002243 1.7e-14 82.0 58 67.2
Ah.10g025010 Amaranthus hybridus HOM05D002187 ORTHO05D002243 2.3e-14 81.6 57 68.4
FAN27G0807 Fragaria x ananassa HOM05D002187 ORTHO05D002243 3.0e-14 81.3 58 63.8
Ciclev10012367m.g Citrus clementina HOM05D002187 ORTHO05D002243 5.0e-14 80.5 60 68.3
Prupe.1G399300 Prunus persica HOM05D002187 ORTHO05D002243 5.0e-14 80.5 56 66.1
Sabra04G0075900 Salix brachista HOM05D002187 ORTHO05D002243 8.6e-14 79.7 56 67.9
CSS0007524 Camellia sinensis var. sinensis HOM05D002187 ORTHO05D002243 1.1e-13 79.3 48 83.3
Cfa013000 Carpinus fangiana HOM05D002187 ORTHO05D002243 2.5e-13 78.2 58 67.2
MD08G1049300 Malus domestica HOM05D002187 ORTHO05D002243 2.5e-13 78.2 57 64.9
CANSAT25G0833 Cannabis sativa HOM05D002187 ORTHO05D002243 4.3e-13 77.4 57 68.4
MD15G1045600 Malus domestica HOM05D002187 ORTHO05D002243 5.6e-13 77.0 57 64.9
CAN.G808.4 Capsicum annuum HOM05D002187 ORTHO05D000018 9.5e-13 76.3 60 60.0
FAN15G1687 Fragaria x ananassa HOM05D002187 ORTHO05D002243 1.2e-12 75.9 55 65.5
Cfa007987 Carpinus fangiana HOM05D002187 ORTHO05D002243 1.6e-12 75.5 56 66.1
HPP92_027402 Vanilla planifolia HOM05D002187 ORTHO05D002243 6.2e-12 73.6 57 59.6
HPP92_027411 Vanilla planifolia HOM05D002187 ORTHO05D002243 6.2e-12 73.6 57 59.6
TWI60G0353 Tripterygium wilfordii HOM05D002187 ORTHO05D002243 8.1e-12 73.2 60 60.0
COL.COLO4_38266 Corchorus olitorius HOM05D002187 ORTHO05D002243 1.4e-11 72.4 60 60.0
Manes.02G064300 Manihot esculenta HOM05D002187 ORTHO05D002243 3.1e-11 71.2 55 63.6
Eucgr.C01613 Eucalyptus grandis HOM05D002187 ORTHO05D002243 1.5e-10 68.9 59 55.9
Atru.chr8.793 Acer truncatum HOM05D002187 ORTHO05D002243 3.4e-10 67.8 55 58.2
Haze_14087 Corylus avellana HOM05D002187 ORTHO05D002243 5.8e-10 67.0 50 68.0
Glyma.U003166 Glycine max HOM05D002187 ORTHO05D002243 5.8e-10 67.0 60 63.3
Eucgr.C01871 Eucalyptus grandis HOM05D000109 ORTHO05D000210 4.9e-09 63.9 55 56.4
THA.LOC104820963 Tarenaya hassleriana HOM05D002187 ORTHO05D002243 8.3e-09 63.2 56 64.3
unitig_747.g21899 Utricularia gibba HOM05D002187 ORTHO05D002243 1.4e-08 62.4 45 66.7
Glyma.06G059200 Glycine max HOM05D002187 ORTHO05D002243 2.4e-08 61.6 52 65.4
Mapoly0114s0058 Marchantia polymorpha HOM05D002187 ORTHO05D002243 2.4e-08 61.6 51 56.9
Ca_00723_v3 Cicer arietinum L. HOM05D002187 ORTHO05D002243 5.4e-08 60.5 41 68.3
Carub.0006s1410 Capsella rubella HOM05D002187 ORTHO05D002243 9.2e-08 59.7 50 58.0
Aa31LG11G13690 Aethionema arabicum HOM05D002187 ORTHO05D002243 1.6e-07 58.9 49 61.2
SEGI_18253 Sequoiadendron giganteum HOM05D002187 ORTHO05D002243 1.6e-07 58.9 56 50.0
BcaNung02213 Brassica carinata HOM05D002187 ORTHO05D002243 3.5e-07 57.8 55 49.1
Thhalv10014393m.g Eutrema salsugineum HOM05D002187 ORTHO05D002243 3.5e-07 57.8 51 52.9
QL06p040425 Quercus lobata HOM05D002187 ORTHO05D002243 4.6e-07 57.4 45 62.2
AL6G26790 Arabidopsis lyrata HOM05D002187 ORTHO05D002243 6.0e-07 57.0 50 54.0
AT5G15910 Arabidopsis thaliana HOM05D002187 ORTHO05D002243 1.0e-06 56.2 48 56.2
BcaC03g18459 Brassica carinata HOM05D002187 ORTHO05D002243 1.3e-06 55.8 55 47.3
A02p03300 Brassica napus HOM05D002187 ORTHO05D002243 1.3e-06 55.8 55 47.3
C02p08060 Brassica napus HOM05D002187 ORTHO05D002243 1.3e-06 55.8 55 47.3
BolC2t06728H Brassica oleracea HOM05D002187 ORTHO05D002243 1.3e-06 55.8 55 47.3
BraA02t05300Z Brassica rapa HOM05D002187 ORTHO05D002243 1.3e-06 55.8 55 47.3
Glyma.U003033 Glycine max HOM05D002187 ORTHO05D002243 2.3e-06 55.1 52 63.5
Pp3c18_5720 Physcomitrium patens HOM05D002187 ORTHO05D002243 2.3e-06 55.1 51 52.9
Sp6g28200 Schrenkiella parvula HOM05D002187 ORTHO05D002243 2.3e-06 55.1 51 51.0
Pp3c8_5120 Physcomitrium patens HOM05D002187 ORTHO05D002243 3.9e-06 54.3 51 54.9
SMO232G0026 Selaginella moellendorffii HOM05D002187 ORTHO05D002243 3.9e-06 54.3 46 50.0
CARHR197400 Cardamine hirsuta HOM05D002187 ORTHO05D002243 8.6e-06 53.1 48 54.2


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