Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-80 303.1 149 100.0
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.6e-72 275.4 142 95.8
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.6e-61 239.6 174 73.6
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.0e-61 239.2 174 73.6
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.7e-61 238.8 175 73.1
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.7e-61 238.8 175 73.1
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.0e-60 236.9 175 72.6
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 9.5e-59 230.3 178 70.2
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.0e-57 224.9 174 70.7
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 8.1e-26 120.9 135 49.6
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 1.4e-25 120.2 132 50.8
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 4.4e-24 115.2 101 56.4
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 4.4e-24 115.2 101 56.4
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 4.4e-24 115.2 101 56.4
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 4.4e-24 115.2 101 56.4
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 2.9e-23 112.5 140 46.4
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 2.7e-21 105.9 115 48.7
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 4.6e-21 105.1 102 50.0
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 1.7e-20 103.2 114 44.7
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 1.7e-20 103.2 126 42.9
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 3.9e-20 102.1 114 43.9
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 5.1e-20 101.7 114 48.2
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 8.7e-20 100.9 131 41.2
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 1.1e-19 100.5 110 47.3
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 2.5e-19 99.4 124 44.4
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 4.3e-19 98.6 111 45.0
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 5.6e-19 98.2 135 39.3
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 9.6e-19 97.4 68 55.9
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.8e-18 95.9 114 44.7
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 4.8e-18 95.1 114 42.1
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 4.8e-18 95.1 58 63.8
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 4.8e-18 95.1 107 47.7
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 4.8e-18 95.1 118 42.4
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 1.1e-17 94.0 111 43.2
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 1.4e-17 93.6 127 39.4
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 1.4e-17 93.6 111 43.2
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 1.8e-17 93.2 116 44.0
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 2.4e-17 92.8 83 54.2
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 4.0e-17 92.0 63 57.1
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 5.3e-17 91.7 111 44.1
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 9.0e-17 90.9 55 67.3
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 9.0e-17 90.9 60 63.3
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 9.0e-17 90.9 106 39.6
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.2e-16 90.5 123 39.8
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 2.0e-16 89.7 114 39.5
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 2.0e-16 89.7 107 44.9
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.0e-16 89.7 105 47.6
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 2.0e-16 89.7 131 38.9
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 3.4e-16 89.0 53 66.0
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 7.6e-16 87.8 54 63.0
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 7.6e-16 87.8 54 63.0
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 9.9e-16 87.4 121 40.5
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 9.9e-16 87.4 53 66.0
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 9.9e-16 87.4 53 66.0
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 2.9e-15 85.9 126 38.1
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 3.8e-15 85.5 112 39.3
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 6.4e-15 84.7 59 62.7
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 3.2e-14 82.4 113 39.8
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 4.2e-14 82.0 115 35.7
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 4.2e-14 82.0 92 48.9
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 5.4e-14 81.6 55 58.2
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 7.1e-14 81.3 157 31.8
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 1.2e-13 80.5 56 60.7
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 1.8e-12 76.6 55 58.2
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.3e-12 76.3 97 44.3
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 3.3e-11 72.4 54 53.7
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 3.3e-11 72.4 54 53.7
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 1.3e-10 70.5 135 35.6
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 1.3e-10 70.5 50 56.0
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 3.7e-10 68.9 52 53.8
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 6.9e-09 64.7 109 34.9
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 1.5e-08 63.5 41 63.4
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 4.5e-08 62.0 51 49.0
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 3.2e-06 55.8 50 40.0


User provided reference genes

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