Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041530 Camellia sinensis var. sinensis HOM05D005986 ORTHO05D007467 2.9e-70 268.5 137 100.0
vmacro15979 Vaccinium macrocarpon HOM05D005986 ORTHO05D007467 6.4e-62 240.7 133 91.7
Dinv07612 Davidia involucrata HOM05D005986 ORTHO05D007467 1.9e-61 239.2 134 90.3
Cpa.g.sc102.15 Carica papaya HOM05D005986 ORTHO05D007467 2.5e-61 238.8 136 90.4
GSVIVG01001142001 Vitis vinifera HOM05D005986 ORTHO05D007467 4.2e-61 238.0 132 92.4
Lj3A1079G52 Lonicera japonica HOM05D005986 ORTHO05D007467 1.2e-60 236.5 134 89.6
Hma1.2p1_0562F.1_g179030 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 2.7e-60 235.3 133 89.5
Haze_12546 Corylus avellana HOM05D005986 ORTHO05D007467 4.6e-60 234.6 134 89.6
Hma1.2p1_1356F.1_g277880 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 6.0e-60 234.2 134 88.8
TWI36G0919 Tripterygium wilfordii HOM05D005986 ORTHO05D007467 6.0e-60 234.2 134 88.8
Hma1.2p1_1356F.1_g277890 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 7.9e-60 233.8 133 88.7
QL03p046965 Quercus lobata HOM05D005986 ORTHO05D007467 1.8e-59 232.6 133 88.7
CiPaw.05G096500 Carya illinoinensis HOM05D005986 ORTHO05D007467 3.9e-59 231.5 134 88.1
COL.COLO4_04222 Corchorus olitorius HOM05D005986 ORTHO05D007467 5.1e-59 231.1 134 88.1
COL.COLO4_06172 Corchorus olitorius HOM05D005986 ORTHO05D007467 5.1e-59 231.1 134 88.1
Eucgr.B03577 Eucalyptus grandis HOM05D005986 ORTHO05D007467 6.7e-59 230.7 136 87.5
Prupe.1G209800 Prunus persica HOM05D005986 ORTHO05D007467 8.7e-59 230.3 134 86.6
Manes.08G097800 Manihot esculenta HOM05D005986 ORTHO05D007467 1.1e-58 229.9 134 85.8
Atru.chr12.1489 Acer truncatum HOM05D005986 ORTHO05D007467 1.9e-58 229.2 134 87.3
Thecc.01G233000 Theobroma cacao HOM05D005986 ORTHO05D007467 1.9e-58 229.2 132 88.6
CANSAT56G1851 Cannabis sativa HOM05D005986 ORTHO05D007467 7.4e-58 227.3 134 85.1
Nn4g22038 Nelumbo nucifera HOM05D005986 ORTHO05D007467 4.8e-57 224.6 132 87.1
FvH4_4g21940 Fragaria vesca HOM05D005986 ORTHO05D007467 6.2e-57 224.2 135 83.7
Gohir.D12G085100 Gossypium hirsutum HOM05D005986 ORTHO05D007467 1.4e-56 223.0 134 85.8
Phvul.003G273800 Phaseolus vulgaris HOM05D005986 ORTHO05D007467 1.4e-56 223.0 134 83.6
arahy.Tifrunner.gnm1.ann1.7WS5BD Arachis hypogaea HOM05D005986 ORTHO05D007467 1.8e-56 222.6 134 82.8
arahy.Tifrunner.gnm1.ann1.946FET Arachis hypogaea HOM05D005986 ORTHO05D007467 1.8e-56 222.6 134 82.8
FAN07G2431 Fragaria x ananassa HOM05D005986 ORTHO05D007467 1.8e-56 222.6 135 83.0
Actinidia33985 Actinidia chinensis HOM05D005986 ORTHO05D007467 2.4e-56 222.2 126 87.3
ClCG10G013170 Citrullus lanatus HOM05D005986 ORTHO05D007467 4.0e-56 221.5 134 82.1
Lj4g0000342 Lotus japonicus HOM05D005986 ORTHO05D007467 4.0e-56 221.5 134 82.1
MD16G1131100 Malus domestica HOM05D005986 ORTHO05D007467 4.0e-56 221.5 134 83.6
VMungo0251G3786 Vigna mungo HOM05D005986 ORTHO05D007467 4.0e-56 221.5 134 82.8
FAN12G1445 Fragaria x ananassa HOM05D005986 ORTHO05D007467 5.3e-56 221.1 135 82.2
Gohir.A12G086500 Gossypium hirsutum HOM05D005986 ORTHO05D007467 9.0e-56 220.3 134 85.8
RcHm_v2.0_Chr4g0428161 Rosa chinensis HOM05D005986 ORTHO05D007467 9.0e-56 220.3 135 82.2
TAR371G0853 Trochodendron aralioides HOM05D005986 ORTHO05D007467 1.5e-55 219.5 132 84.1
MELO3C026759.2 Cucumis melo HOM05D005986 ORTHO05D007467 2.0e-55 219.2 134 82.1
Sed0002782 Sechium edule HOM05D005986 ORTHO05D007467 2.6e-55 218.8 134 79.9
Ciclev10028467m.g Citrus clementina HOM05D005986 ORTHO05D007467 3.4e-55 218.4 134 82.1
MD13G1135500 Malus domestica HOM05D005986 ORTHO05D007467 3.4e-55 218.4 134 81.3
CsaV3_3G043440 Cucumis sativus L. HOM05D005986 ORTHO05D007467 4.5e-55 218.0 134 81.3
PSO478G1012 Papaver somniferum HOM05D005986 ORTHO05D007467 5.8e-55 217.6 134 82.1
Ca_22545_v3 Cicer arietinum L. HOM05D005986 ORTHO05D007467 1.0e-54 216.9 135 81.5
Gohir.A09G003100 Gossypium hirsutum HOM05D005986 ORTHO05D007467 1.0e-54 216.9 134 82.8
Lalb_Chr16g0391881 Lupinus albus HOM05D005986 ORTHO05D007467 1.0e-54 216.9 134 81.3
Sed0000271 Sechium edule HOM05D005986 ORTHO05D007467 1.7e-54 216.1 134 79.1
Potri.001G072400 Populus trichocarpa HOM05D005986 ORTHO05D007467 2.2e-54 215.7 132 83.3
Gorai.008G095500 Gossypium raimondii HOM05D005986 ORTHO05D007467 3.8e-54 214.9 127 86.6
PSO017G0169 Papaver somniferum HOM05D005986 ORTHO05D007467 3.8e-54 214.9 134 80.6
Sp2g18360 Schrenkiella parvula HOM05D005986 ORTHO05D007467 3.8e-54 214.9 132 81.1
Zm00001eb084350 Zea mays HOM05D005986 ORTHO05D007467 3.8e-54 214.9 134 81.3
TAR627G0548 Trochodendron aralioides HOM05D005986 ORTHO05D007467 4.9e-54 214.5 132 81.8
Cc11_g14820 Coffea canephora HOM05D005986 ORTHO05D007467 6.5e-54 214.2 134 79.9
Medtr8g070480 Medicago truncatula HOM05D005986 ORTHO05D007467 1.1e-53 213.4 135 80.7
CDE02G3075 Ceratophyllum demersum HOM05D005986 ORTHO05D007467 2.5e-53 212.2 134 79.1
Carub.0008s0731 Capsella rubella HOM05D005986 ORTHO05D007467 5.5e-53 211.1 134 78.4
Thhalv10004270m.g Eutrema salsugineum HOM05D005986 ORTHO05D007467 9.3e-53 210.3 134 78.4
Os04g0405600 Oryza sativa ssp. japonica HOM05D005986 ORTHO05D007467 9.3e-53 210.3 132 80.3
Potri.003G158400 Populus trichocarpa HOM05D005986 ORTHO05D007467 1.2e-52 209.9 129 82.2
MSTRG.8073 Avicennia marina HOM05D005986 ORTHO05D007467 1.6e-52 209.5 134 78.4
Sabra03G0114800 Salix brachista HOM05D005986 ORTHO05D007467 1.6e-52 209.5 132 81.1
Sc11g0000020 Simmondsia chinensis HOM05D005986 ORTHO05D007467 1.6e-52 209.5 134 77.6
AL8G19850 Arabidopsis lyrata HOM05D005986 ORTHO05D007467 2.1e-52 209.1 134 77.6
TPR.G6140 Trifolium pratense HOM05D005986 ORTHO05D007467 2.1e-52 209.1 135 79.3
HPP92_001278 Vanilla planifolia HOM05D005986 ORTHO05D007467 2.1e-52 209.1 134 79.1
Gohir.D09G002900 Gossypium hirsutum HOM05D005986 ORTHO05D007467 3.5e-52 208.4 127 83.5
PGR102G0450 Punica granatum HOM05D005986 ORTHO05D007467 4.6e-52 208.0 134 78.4
C07p38760 Brassica napus HOM05D005986 ORTHO05D007467 1.0e-51 206.8 132 79.5
AUR62042784 Chenopodium quinoa HOM05D005986 ORTHO05D007467 1.0e-51 206.8 132 78.8
Lsat_1_v5_gn_3_33381 Lactuca sativa HOM05D005986 ORTHO05D007467 1.0e-51 206.8 134 78.4
AT5G47860 Arabidopsis thaliana HOM05D005986 ORTHO05D007467 1.3e-51 206.5 134 76.9
Gorai.006G003600 Gossypium raimondii HOM05D005986 ORTHO05D007467 1.8e-51 206.1 127 82.7
Migut.K01148 Erythranthe guttata HOM05D005986 ORTHO05D007467 2.3e-51 205.7 132 78.0
BolC7t44395H Brassica oleracea HOM05D005986 ORTHO05D007467 3.0e-51 205.3 132 78.8
Aqoxy1G00505 Aquilegia oxysepala HOM05D005986 ORTHO05D007467 3.9e-51 204.9 134 79.9
CDE06G1414 Ceratophyllum demersum HOM05D005986 ORTHO05D007467 3.9e-51 204.9 134 76.9
ECA246G5024 Erigeron canadensis HOM05D005986 ORTHO05D007467 3.9e-51 204.9 134 76.9
DCAR_006993 Daucus carota HOM05D005986 ORTHO05D007467 6.7e-51 204.1 134 76.9
A06p39510 Brassica napus HOM05D005986 ORTHO05D007467 8.7e-51 203.8 132 78.0
BraA06t26866Z Brassica rapa HOM05D005986 ORTHO05D007467 8.7e-51 203.8 132 78.0
Nitab4.5_0002199g0020 Nicotiana tabacum HOM05D005986 ORTHO05D007467 8.7e-51 203.8 133 79.7
Migut.H01175 Erythranthe guttata HOM05D005986 ORTHO05D007467 1.1e-50 203.4 132 77.3
Sabra01G0051000 Salix brachista HOM05D005986 ORTHO05D007467 1.1e-50 203.4 131 79.4
Nitab4.5_0000069g0470 Nicotiana tabacum HOM05D005986 ORTHO05D007467 4.3e-50 201.4 133 78.9
CAN.G282.72 Capsicum annuum HOM05D005986 ORTHO05D007467 7.4e-50 200.7 133 78.2
CARHR184430 Cardamine hirsuta HOM05D005986 ORTHO05D007467 7.4e-50 200.7 134 75.4
AUR62019578 Chenopodium quinoa HOM05D005986 ORTHO05D007467 7.4e-50 200.7 132 76.5
PGSC0003DMG401016404 Solanum tuberosum HOM05D005986 ORTHO05D007467 1.6e-49 199.5 133 77.4
HanXRQChr06g0175331 Helianthus annuus HOM05D005986 ORTHO05D007467 2.2e-49 199.1 134 76.9
Solyc01g008070.3 Solanum lycopersicum HOM05D005986 ORTHO05D007467 2.2e-49 199.1 133 77.4
Sopen01g003630 Solanum pennellii HOM05D005986 ORTHO05D007467 2.2e-49 199.1 133 77.4
EL10Ac4g08348 Beta vulgaris HOM05D005986 ORTHO05D007467 3.7e-49 198.4 132 75.0
ATR0582G342 Amborella trichopoda HOM05D005986 ORTHO05D007467 1.8e-48 196.1 134 73.1
Aa31LG3G14160 Aethionema arabicum HOM05D005986 ORTHO05D007467 1.5e-47 193.0 164 63.4
THA.LOC104807194 Tarenaya hassleriana HOM05D005986 ORTHO05D007467 1.5e-47 193.0 134 75.4
HanXRQChr17g0540591 Helianthus annuus HOM05D005986 ORTHO05D007467 2.6e-47 192.2 136 73.5
Lsat_1_v5_gn_1_109040 Lactuca sativa HOM05D005986 ORTHO05D007467 8.5e-46 187.2 133 72.2
Peaxi162Scf00097g01214 Petunia axillaris HOM05D005986 ORTHO05D007467 8.5e-46 187.2 132 76.5
SEGI_07632 Sequoiadendron giganteum HOM05D005986 ORTHO05D007467 1.1e-42 176.8 126 71.4
SGA_v2.0_scaffold258G45750 Striga asiatica HOM05D005986 ORTHO05D007467 2.0e-42 176.0 126 72.2
Glyma.08G265400 Glycine max HOM05D005986 ORTHO05D007467 9.7e-42 173.7 126 71.4
unitig_747.g21105 Utricularia gibba HOM05D005986 ORTHO05D007467 1.1e-40 170.2 134 65.7
Oeu056144.2 Olea europaea HOM05D005986 ORTHO05D007467 6.9e-40 167.5 94 90.4
Duzib147G0525 Durio zibethinus HOM05D005986 ORTHO05D007467 2.6e-31 139.0 78 87.2
AagrBONN_evm.TU.Sc2ySwM_228.1585 Anthoceros agrestis HOM05D005986 ORTHO05D007467 7.7e-31 137.5 122 59.0
SMO145G0091 Selaginella moellendorffii HOM05D005986 ORTHO05D007467 1.4e-29 133.3 124 55.6
Pp3c24_14070 Physcomitrium patens HOM05D005986 ORTHO05D007467 1.3e-25 120.2 129 48.8
Lsat_1_v5_gn_5_29241 Lactuca sativa HOM05D005986 ORTHO05D007467 3.5e-15 85.5 63 71.4
Cre01.g000900 Chlamydomonas reinhardtii HOM05D005986 ORTHO05D007467 4.5e-15 85.1 140 35.7
Lsat_1_v5_gn_7_17261 Lactuca sativa HOM05D005986 ORTHO05D007467 4.5e-15 85.1 76 63.2
PRCOL_00002187 Prasinoderma coloniale HOM05D005986 ORTHO05D007467 2.9e-06 55.8 77 46.8


User provided reference genes

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