Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041528 Camellia sinensis var. sinensis HOM05D008165 ORTHO05D007516 1.2e-47 193.7 89 100.0
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 8.9e-11 71.2 43 74.4
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 2.2e-09 66.6 44 68.2
Actinidia13954 Actinidia chinensis HOM05D008165 ORTHO05D007516 6.4e-09 65.1 45 68.9
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 1.9e-08 63.5 48 58.3
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 9.2e-08 61.2 44 61.4
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 9.2e-08 61.2 48 62.5
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 1.2e-07 60.8 44 61.4
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 1.6e-07 60.5 43 62.8
FAN28G1178 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.6e-07 60.5 46 58.7
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 4.6e-07 58.9 48 58.3
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 4.6e-07 58.9 49 55.1
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 1.3e-06 57.4 43 60.5
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 1.7e-06 57.0 80 45.0
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 2.3e-06 56.6 49 53.1
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.3e-06 56.6 42 61.9
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 3.0e-06 56.2 44 56.8
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 3.0e-06 56.2 49 53.1
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 5.0e-06 55.5 43 60.5
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 5.0e-06 55.5 40 70.0
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 6.6e-06 55.1 43 62.8
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 6.6e-06 55.1 43 58.1
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 6.6e-06 55.1 56 48.2
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 8.6e-06 54.7 57 47.4


User provided reference genes

Program Settings