Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.6e-148 526.9 262 100.0
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-114 416.0 265 82.3
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.0e-108 395.6 273 78.4
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.1e-108 394.8 260 78.1
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.2e-74 283.1 293 56.3
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.2e-71 273.1 274 58.0
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.0e-68 262.3 292 54.5
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-61 240.0 293 50.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 8.9e-28 128.3 298 34.9
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-22 110.9 291 28.2
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.1e-21 107.1 297 26.9
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.8e-21 106.7 120 51.7
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-20 103.2 266 30.5
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.1e-20 103.2 261 29.5
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.2e-20 102.4 208 35.1
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.4e-17 94.4 136 42.6
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.1e-17 92.0 136 41.9
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.8e-16 88.6 98 48.0
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.1e-15 85.9 291 27.1
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-13 80.9 91 49.5
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 1.4e-12 77.8 94 46.8
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.0e-12 75.1 209 33.0
CSS0036223 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.2e-11 74.7 56 60.7
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 3.4e-11 73.2 48 70.8
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.4e-11 72.8 94 36.2
RhsimUnG0025000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-10 71.2 94 35.1
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.7e-10 70.9 71 56.3
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.7e-10 70.9 71 56.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.2e-10 70.5 257 23.3
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 2.9e-10 70.1 33 90.9
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.9e-10 70.1 71 43.7
MBI04_g25418_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.4e-10 68.6 139 29.5
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.4e-10 68.6 244 29.5
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 1.1e-09 68.2 119 34.5
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.1e-09 68.2 200 25.0
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.4e-09 67.8 96 38.5
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.9e-09 67.4 200 25.0
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.4e-09 67.0 71 40.8
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.2e-09 66.6 257 23.0
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.2e-09 66.6 256 21.1
Actinidia39405 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.2e-09 66.2 94 34.0
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.2e-09 66.2 71 40.8
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 4.2e-09 66.2 71 40.8
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.4e-09 65.9 134 30.6
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.1e-09 65.5 54 59.3
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 7.1e-09 65.5 256 21.1
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.2e-08 64.7 93 37.6
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 64.7 328 22.0
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 64.7 328 22.0
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-08 64.7 151 29.1
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.6e-08 64.3 47 66.0
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-08 64.3 328 22.0
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 64.3 134 29.9
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 64.3 134 29.9
CSS0045362 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 2.1e-08 63.9 72 47.2
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-08 63.9 151 30.5
MBI17_g38326_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-08 63.5 104 33.7
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-08 63.5 94 35.1
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.5e-08 63.2 190 27.4
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.5e-08 63.2 72 45.8
CSS0038432 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.5e-08 63.2 72 43.1
MBI14_g01819_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-08 63.2 151 29.1
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.5e-08 63.2 176 26.7
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.6e-08 62.8 328 21.6
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.6e-08 62.8 251 25.9
CSS0014258 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.0e-08 62.4 72 45.8
CSS0020249 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.0e-08 62.4 72 45.8
CSS0020818 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 6.0e-08 62.4 72 45.8
MELO3C027970.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.0e-08 62.4 107 33.6
MBI05_g15995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.0e-08 62.4 140 30.0
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.0e-08 62.4 151 29.1
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 6.0e-08 62.4 251 24.7
CiPaw.10G065700 Carya illinoinensis HOM05D000791 ORTHO05D000669 7.8e-08 62.0 204 25.5
MELO3C032745.2 Cucumis melo HOM05D001963 ORTHO05D001863 7.8e-08 62.0 97 34.0
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.8e-08 62.0 151 29.1
MBI14_g16528_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.8e-08 62.0 104 32.7
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.8e-08 62.0 151 29.1
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.0e-07 61.6 93 36.6
MELO3C028240.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.0e-07 61.6 96 34.4
MELO3C030180.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.0e-07 61.6 97 33.0
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-07 61.6 148 29.7
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-07 61.6 202 23.8
CSS0015949 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.3e-07 61.2 72 45.8
MBI07_g41667_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-07 61.2 151 28.5
CSS0015286 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 1.7e-07 60.8 72 44.4
MELO3C030815.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.7e-07 60.8 96 34.4
MELO3C033641.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.7e-07 60.8 96 33.3
MELO3C034455.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.7e-07 60.8 96 34.4
MBI10_g06414_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-07 60.8 136 30.1
MELO3C028156.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.3e-07 60.5 96 34.4
MBI11_g33696_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-07 60.5 152 28.9
MBI13_g26213_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-07 60.5 151 28.5
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-07 60.5 105 34.3
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 3.0e-07 60.1 44 63.6
CSS0030614 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 3.0e-07 60.1 71 38.0
CSS0033294 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 3.0e-07 60.1 71 38.0
MELO3C034470.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.0e-07 60.1 97 34.0
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-07 60.1 109 32.1
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 3.0e-07 60.1 193 26.4
CSS0049548 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 3.9e-07 59.7 67 46.3
vmacro12701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.9e-07 59.7 104 33.7
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.9e-07 59.7 104 33.7
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.9e-07 59.7 104 33.7
MBI14_g25533_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-07 59.3 151 28.5
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.1e-07 59.3 212 25.0
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 6.6e-07 58.9 170 30.6
MELO3C027924.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.7e-07 58.5 164 26.8
MELO3C035485.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.7e-07 58.5 122 29.5
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.7e-07 58.5 149 28.2
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.7e-07 58.5 131 26.7
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.1e-06 58.2 130 30.8
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.1e-06 58.2 130 30.8
MELO3C029550.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.1e-06 58.2 97 32.0
MELO3C031923.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.1e-06 58.2 96 35.4
MBI08_g40514_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-06 58.2 101 32.7
MELO3C034953.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.5e-06 57.8 96 33.3
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.9e-06 57.4 133 30.1
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 1.9e-06 57.4 122 28.7
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 1.9e-06 57.4 123 31.7
Actinidia36705 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.5e-06 57.0 65 41.5
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 3.3e-06 56.6 122 33.6
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 7.3e-06 55.5 254 23.6
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 7.3e-06 55.5 138 32.6
MELO3C034958.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.6e-06 55.1 96 32.3
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.6e-06 55.1 117 28.2


User provided reference genes

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