Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041504 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 1.5e-150 536.2 281 100.0
CSS0037037 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 2.2e-149 532.3 281 99.3
CSS0034323 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 1.3e-136 490.0 273 94.9
CSS0025398 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 7.5e-65 251.5 228 66.7
Actinidia09097 Actinidia chinensis HOM05D001695 ORTHO05D002735 2.3e-29 133.7 225 40.4
Actinidia24930 Actinidia chinensis HOM05D001695 ORTHO05D002735 1.5e-28 131.0 228 39.0
Haze_24517 Corylus avellana HOM05D001695 ORTHO05D002735 1.5e-28 131.0 188 42.0
Nitab4.5_0000187g0060 Nicotiana tabacum HOM05D001695 ORTHO05D002735 9.0e-26 121.7 209 37.8
Medtr7g095920 Medicago truncatula HOM05D001695 ORTHO05D002735 3.4e-25 119.8 205 37.6
Lalb_Chr21g0306321 Lupinus albus HOM05D001695 ORTHO05D002735 1.7e-24 117.5 200 38.5
Prupe.8G233300 Prunus persica HOM05D001695 ORTHO05D002735 1.7e-24 117.5 230 34.8
CiPaw.03G256000 Carya illinoinensis HOM05D001695 ORTHO05D002735 3.8e-24 116.3 229 34.5
MD03G1256200 Malus domestica HOM05D001695 ORTHO05D002735 3.8e-24 116.3 228 34.6
VMungo1383G2569 Vigna mungo HOM05D001695 ORTHO05D002735 1.1e-23 114.8 174 41.4
Medtr1g471050 Medicago truncatula HOM05D001695 ORTHO05D002735 1.9e-23 114.0 193 37.3
Psat6g058200 Pisum sativum HOM05D001695 ORTHO05D002735 1.9e-23 114.0 205 36.1
Thecc.01G269300 Theobroma cacao HOM05D001695 ORTHO05D002735 4.2e-23 112.8 230 35.7
MD11G1277000 Malus domestica HOM05D001695 ORTHO05D002735 7.1e-23 112.1 209 35.4
Manes.05G082900 Manihot esculenta HOM05D001695 ORTHO05D002735 1.2e-22 111.3 193 37.3
TAR365G0574 Trochodendron aralioides HOM05D001695 ORTHO05D002735 1.2e-22 111.3 228 34.6
TPR.G19108 Trifolium pratense HOM05D001695 ORTHO05D002735 1.6e-22 110.9 208 36.1
Peaxi162Scf00165g00212 Petunia axillaris HOM05D001695 ORTHO05D002735 2.1e-22 110.5 221 33.0
FAN15G1129 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.7e-22 110.2 228 33.8
FAN20G2833 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.7e-22 110.2 228 33.8
Eucgr.K03319 Eucalyptus grandis HOM05D001695 ORTHO05D002735 3.5e-22 109.8 241 34.4
FAN27G1986 Fragaria x ananassa HOM05D001695 ORTHO05D002735 3.5e-22 109.8 228 33.8
TWI12G0096 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 7.8e-22 108.6 228 32.9
FvH4_2g22790 Fragaria vesca HOM05D001695 ORTHO05D002735 1.0e-21 108.2 228 32.9
arahy.Tifrunner.gnm1.ann1.Z2VWUQ Arachis hypogaea HOM05D001695 ORTHO05D002735 1.3e-21 107.8 163 39.9
Glyma.10G031100 Glycine max HOM05D001695 ORTHO05D002735 1.3e-21 107.8 228 33.8
GSVIVG01003138001 Vitis vinifera HOM05D001695 ORTHO05D002735 1.7e-21 107.5 228 35.5
Cpa.g.sc1247.1 Carica papaya HOM05D001695 ORTHO05D002735 2.3e-21 107.1 229 34.1
CiPaw.04G181000 Carya illinoinensis HOM05D001695 ORTHO05D002735 2.3e-21 107.1 159 39.6
FAN24G2593 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.3e-21 107.1 228 32.9
Oeu025777.1 Olea europaea HOM05D001695 ORTHO05D002735 2.3e-21 107.1 199 35.7
MBI11_g26137_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 3.0e-21 106.7 143 41.3
RcHm_v2.0_Chr6g0289711 Rosa chinensis HOM05D001695 ORTHO05D002735 3.0e-21 106.7 228 32.5
Ciclev10023937m.g Citrus clementina HOM05D001695 ORTHO05D002735 3.9e-21 106.3 229 33.6
Dinv34556 Davidia involucrata HOM05D001695 ORTHO05D002735 3.9e-21 106.3 200 37.0
Glyma.02G143300 Glycine max HOM05D001695 ORTHO05D002735 6.6e-21 105.5 228 34.2
QL12p042507 Quercus lobata HOM05D001695 ORTHO05D002735 6.6e-21 105.5 159 40.3
Migut.D00346 Erythranthe guttata HOM05D001695 ORTHO05D002735 1.1e-20 104.8 158 38.0
Sed0027528 Sechium edule HOM05D001695 ORTHO05D002735 1.1e-20 104.8 232 33.2
arahy.Tifrunner.gnm1.ann1.S9HU1U Arachis hypogaea HOM05D001695 ORTHO05D002735 1.9e-20 104.0 153 41.2
EL10Ac5g10482 Beta vulgaris HOM05D001695 ORTHO05D002735 1.9e-20 104.0 98 50.0
MSTRG.21518 Avicennia marina HOM05D001695 ORTHO05D002735 4.3e-20 102.8 159 37.7
PGR044G2111 Punica granatum HOM05D001695 ORTHO05D002735 4.3e-20 102.8 209 33.0
CANSAT25G1261 Cannabis sativa HOM05D001695 ORTHO05D002735 5.6e-20 102.4 228 33.8
Phvul.001G155600 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 5.6e-20 102.4 157 40.8
Sed0003781 Sechium edule HOM05D001695 ORTHO05D002735 5.6e-20 102.4 157 39.5
COL.COLO4_06098 Corchorus olitorius HOM05D001695 ORTHO05D002735 9.6e-20 101.7 228 32.0
Lj1g0012318 Lotus japonicus HOM05D001695 ORTHO05D002735 9.6e-20 101.7 207 33.8
PSO121G0001 Papaver somniferum HOM05D001695 ORTHO05D002735 9.6e-20 101.7 236 33.1
Atru.chr5.1541 Acer truncatum HOM05D001695 ORTHO05D002735 1.6e-19 100.9 155 40.6
CsaV3_2G013780 Cucumis sativus L. HOM05D001695 ORTHO05D002735 1.6e-19 100.9 159 39.0
Atru.chr3.758 Acer truncatum HOM05D001695 ORTHO05D002735 2.1e-19 100.5 160 40.0
Aqoxy2G03493 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 2.1e-19 100.5 228 32.9
ClCG07G000550 Citrullus lanatus HOM05D001695 ORTHO05D002735 2.8e-19 100.1 203 34.0
MELO3C014318.2 Cucumis melo HOM05D001695 ORTHO05D002735 3.6e-19 99.8 159 38.4
Gohir.A07G208000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 4.8e-19 99.4 232 33.6
PSO461G0037 Papaver somniferum HOM05D001695 ORTHO05D002735 4.8e-19 99.4 235 32.8
Phvul.007G175900 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 4.8e-19 99.4 179 35.2
Cc01_g18940 Coffea canephora HOM05D001695 ORTHO05D002735 6.2e-19 99.0 162 37.7
PSO210G5739 Papaver somniferum HOM05D001695 ORTHO05D002735 8.1e-19 98.6 235 32.3
PSO210G5800 Papaver somniferum HOM05D001695 ORTHO05D002735 8.1e-19 98.6 235 32.3
SalBow4G0856 Salvia bowleyana HOM05D001695 ORTHO05D002735 8.1e-19 98.6 159 37.7
Lalb_Chr01g0019951 Lupinus albus HOM05D001695 ORTHO05D002735 1.1e-18 98.2 193 32.6
Gorai.001G242000 Gossypium raimondii HOM05D001695 ORTHO05D002735 1.4e-18 97.8 232 33.6
Solyc09g065750.3 Solanum lycopersicum HOM05D001695 ORTHO05D002735 3.1e-18 96.7 158 36.7
DCAR_012509 Daucus carota HOM05D001695 ORTHO05D002735 4.0e-18 96.3 228 31.6
Gohir.D07G214000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 4.0e-18 96.3 232 33.2
Potri.005G216400 Populus trichocarpa HOM05D001695 ORTHO05D002735 4.0e-18 96.3 229 31.9
Nn3g19467 Nelumbo nucifera HOM05D001695 ORTHO05D002735 9.0e-18 95.1 170 35.3
VMungo0720G1092 Vigna mungo HOM05D001695 ORTHO05D002735 3.8e-16 89.7 192 32.8
DCAR_018439 Daucus carota HOM05D001695 ORTHO05D002735 1.4e-15 87.8 163 35.0
Lsat_1_v5_gn_9_7981 Lactuca sativa HOM05D001695 ORTHO05D002735 2.4e-15 87.0 176 34.1
Potri.002G046500 Populus trichocarpa HOM05D001695 ORTHO05D002735 3.2e-15 86.7 228 28.9
Sc05g0001110 Simmondsia chinensis HOM05D001695 ORTHO05D002735 3.2e-15 86.7 128 35.2
Lj2A1162G32 Lonicera japonica HOM05D001695 ORTHO05D002735 4.2e-15 86.3 100 49.0
TPR.G39069 Trifolium pratense HOM05D001695 ORTHO05D002735 4.2e-15 86.3 54 72.2
Lsat_1_v5_gn_8_94460 Lactuca sativa HOM05D001695 ORTHO05D002735 2.1e-14 84.0 139 35.3
ECA236G1508 Erigeron canadensis HOM05D001695 ORTHO05D002735 2.7e-14 83.6 206 29.1
HanXRQChr13g0419591 Helianthus annuus HOM05D001695 ORTHO05D002735 3.5e-14 83.2 159 31.4
Rhsim01G0271300 Rhododendron simsii HOM05D001695 ORTHO05D002735 3.5e-14 83.2 254 28.7
ECA247G0338 Erigeron canadensis HOM05D001695 ORTHO05D002735 7.9e-14 82.0 201 28.9
arahy.Tifrunner.gnm1.ann1.Q3JBH6 Arachis hypogaea HOM05D001695 ORTHO05D002735 3.0e-13 80.1 53 66.0
HanXRQChr15g0466931 Helianthus annuus HOM05D001695 ORTHO05D002735 6.7e-13 79.0 222 30.2
MSTRG.18276 Avicennia marina HOM05D001695 ORTHO05D002735 8.7e-13 78.6 52 67.3
unitig_0.g1130 Utricularia gibba HOM05D001695 ORTHO05D002735 2.5e-12 77.0 111 44.1
Zm00001eb114700 Zea mays HOM05D001695 ORTHO05D002735 4.3e-12 76.3 159 30.2
Zm00001eb114610 Zea mays HOM05D001695 ORTHO05D002735 5.6e-12 75.9 159 30.2
PGSC0003DMG400019307 Solanum tuberosum HOM05D001695 ORTHO05D002735 1.6e-11 74.3 42 78.6
Glyma.03G158000 Glycine max HOM05D001695 ORTHO05D002735 2.8e-11 73.6 95 44.2
Glyma.19G160300 Glycine max HOM05D001695 ORTHO05D002735 1.8e-10 70.9 52 63.5
SalBow4G3275 Salvia bowleyana HOM05D001695 ORTHO05D002735 3.1e-10 70.1 37 81.1
arahy.Tifrunner.gnm1.ann1.PL7EZQ Arachis hypogaea HOM05D001695 ORTHO05D002735 1.2e-09 68.2 67 52.2
CAN.G1797.1 Capsicum annuum HOM05D001695 ORTHO05D002735 1.2e-09 68.2 34 85.3
Aa31LG1G9480 Aethionema arabicum HOM05D001695 ORTHO05D002735 5.8e-09 65.9 210 25.7
TPR.G39141 Trifolium pratense HOM05D001695 ORTHO05D002735 9.9e-09 65.1 34 79.4
BcaC07g42270 Brassica carinata HOM05D001695 ORTHO05D002735 1.7e-08 64.3 157 28.0
PSO210G5923 Papaver somniferum HOM05D001695 ORTHO05D002735 2.9e-08 63.5 102 39.2
ECA247G1754 Erigeron canadensis HOM05D001695 ORTHO05D002735 4.9e-08 62.8 194 24.2
Sabra05G0166000 Salix brachista HOM05D001695 ORTHO05D002735 6.4e-08 62.4 123 34.1
THA.LOC104801253 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 6.4e-08 62.4 160 30.0
SGA_v2.0_scaffold1G00547 Striga asiatica HOM05D001695 ORTHO05D002735 8.4e-08 62.0 90 38.9
Sabra05G0165900 Salix brachista HOM05D001695 ORTHO05D002735 1.1e-07 61.6 34 76.5
Thhalv10008499m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 3.2e-07 60.1 157 27.4
CDE07G0714 Ceratophyllum demersum HOM05D001695 ORTHO05D002735 4.2e-07 59.7 36 63.9
ATR0606G001 Amborella trichopoda HOM05D001695 ORTHO05D002735 5.5e-07 59.3 34 64.7
arahy.Tifrunner.gnm1.ann1.IA8L34 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.6e-06 57.8 34 70.6
A09p68380 Brassica napus HOM05D001695 ORTHO05D002735 1.6e-06 57.8 33 69.7
C08p52950 Brassica napus HOM05D001695 ORTHO05D002735 1.6e-06 57.8 33 69.7
BolC8t52811H Brassica oleracea HOM05D001695 ORTHO05D002735 1.6e-06 57.8 33 69.7
BraA09t42174Z Brassica rapa HOM05D001695 ORTHO05D002735 1.6e-06 57.8 33 69.7
AT1G03055 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 2.7e-06 57.0 156 26.9
PSO210G7498 Papaver somniferum HOM05D001695 ORTHO05D002735 2.7e-06 57.0 33 69.7
AL1G12510 Arabidopsis lyrata HOM05D001695 ORTHO05D002735 4.6e-06 56.2 157 26.1
Sp1g02050 Schrenkiella parvula HOM05D001695 ORTHO05D002735 6.0e-06 55.8 33 66.7
AUR62011960 Chenopodium quinoa HOM05D001695 ORTHO05D002735 7.9e-06 55.5 66 34.8


User provided reference genes

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