Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041482 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D019705 7.5e-109 397.1 191 100.0
CSS0010884 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D019705 1.1e-88 330.1 220 77.7
CSS0039748 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D019705 3.6e-63 245.4 221 63.3
CSS0010584 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D007803 4.1e-38 162.2 157 60.5
Dinv12073 Davidia involucrata HOM05D005784 ORTHO05D007803 2.9e-36 156.0 160 57.5
QL09p037402 Quercus lobata HOM05D005784 ORTHO05D007803 2.5e-35 152.9 157 56.7
Rhsim01G0293700 Rhododendron simsii HOM05D005784 ORTHO05D007803 2.5e-35 152.9 157 56.7
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 4.2e-35 152.1 179 52.0
Actinidia25875 Actinidia chinensis HOM05D005784 ORTHO05D007803 5.5e-35 151.8 157 56.1
MBI18_g03858_MAGBIO Magnolia biondii HOM05D005784 ORTHO05D007803 1.6e-34 150.2 157 56.1
TAR362G0637 Trochodendron aralioides HOM05D005784 ORTHO05D007803 1.0e-33 147.5 150 55.3
TAR362G1337 Trochodendron aralioides HOM05D005784 ORTHO05D007803 1.0e-33 147.5 150 55.3
arahy.Tifrunner.gnm1.ann1.7C5766 Arachis hypogaea HOM05D005784 ORTHO05D007803 1.8e-33 146.7 160 53.1
arahy.Tifrunner.gnm1.ann1.AZ9DWX Arachis hypogaea HOM05D005784 ORTHO05D007803 1.8e-33 146.7 160 53.1
Potri.002G185400 Populus trichocarpa HOM05D005784 ORTHO05D007803 1.8e-33 146.7 153 54.9
PGR042G0128 Punica granatum HOM05D005784 ORTHO05D007803 1.8e-33 146.7 150 55.3
GSVIVG01028229001 Vitis vinifera HOM05D005784 ORTHO05D007803 1.8e-33 146.7 160 53.1
Cfa004924 Carpinus fangiana HOM05D000351 ORTHO05D007803 3.9e-33 145.6 157 55.4
TWI59G1466 Tripterygium wilfordii HOM05D005784 ORTHO05D007803 5.1e-33 145.2 150 56.0
Phvul.007G208100 Phaseolus vulgaris HOM05D005784 ORTHO05D007803 6.7e-33 144.8 157 55.4
Glyma.02G006500 Glycine max HOM05D005784 ORTHO05D007803 1.1e-32 144.1 160 53.8
Gohir.A11G105900 Gossypium hirsutum HOM05D005784 ORTHO05D007803 1.1e-32 144.1 150 54.7
Gohir.D11G110800 Gossypium hirsutum HOM05D005784 ORTHO05D007803 1.1e-32 144.1 150 54.7
Gorai.007G118500 Gossypium raimondii HOM05D005784 ORTHO05D007803 1.1e-32 144.1 150 54.7
Haze_05164 Corylus avellana HOM05D005784 ORTHO05D007803 1.5e-32 143.7 157 54.8
Lsat_1_v5_gn_8_167141 Lactuca sativa HOM05D005784 ORTHO05D007803 1.5e-32 143.7 160 53.1
Peaxi162Scf00309g00620 Petunia axillaris HOM05D005784 ORTHO05D007803 1.5e-32 143.7 150 56.0
Sed0007139 Sechium edule HOM05D005784 ORTHO05D007803 1.5e-32 143.7 157 54.8
Duzib138G0454 Durio zibethinus HOM05D005784 ORTHO05D007803 2.0e-32 143.3 157 53.5
Manes.05G007100 Manihot esculenta HOM05D005784 ORTHO05D007803 2.0e-32 143.3 157 53.5
Atru.chr5.839 Acer truncatum HOM05D005784 ORTHO05D007803 2.6e-32 142.9 157 53.5
Cc01_g21720 Coffea canephora HOM05D005784 ORTHO05D007803 2.6e-32 142.9 157 54.1
Glyma.10G139300 Glycine max HOM05D005784 ORTHO05D007803 2.6e-32 142.9 157 54.1
Lj5g0003944 Lotus japonicus HOM05D005784 ORTHO05D007803 2.6e-32 142.9 157 54.8
Thecc.01G327300 Theobroma cacao HOM05D005784 ORTHO05D007803 2.6e-32 142.9 157 53.5
VMungo0720G0010 Vigna mungo HOM05D005784 ORTHO05D007803 2.6e-32 142.9 157 54.1
CsaV3_5G036980 Cucumis sativus L. HOM05D005784 ORTHO05D007803 4.4e-32 142.1 157 54.8
CiPaw.08G082400 Carya illinoinensis HOM05D005784 ORTHO05D007803 5.7e-32 141.7 150 56.0
Nitab4.5_0008825g0010 Nicotiana tabacum HOM05D005784 ORTHO05D007803 5.7e-32 141.7 150 54.7
HanXRQChr06g0167951 Helianthus annuus HOM05D005784 ORTHO05D007803 7.4e-32 141.4 157 54.1
COL.COLO4_23104 Corchorus olitorius HOM05D005784 ORTHO05D007803 9.7e-32 141.0 157 53.5
Ciclev10019335m.g Citrus clementina HOM05D005784 ORTHO05D007803 1.3e-31 140.6 157 52.2
Duzib133G0630 Durio zibethinus HOM05D005784 ORTHO05D007803 1.3e-31 140.6 157 52.9
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.3e-31 140.6 150 54.7
MELO3C026475.2 Cucumis melo HOM05D005784 ORTHO05D007803 1.7e-31 140.2 157 54.1
Lalb_Chr06g0167151 Lupinus albus HOM05D005784 ORTHO05D007803 1.7e-31 140.2 167 51.5
MD09G1291600 Malus domestica HOM05D005784 ORTHO05D007803 1.7e-31 140.2 157 52.2
DCAR_005710 Daucus carota HOM05D005784 ORTHO05D007803 3.7e-31 139.0 150 52.7
Nitab4.5_0003092g0090 Nicotiana tabacum HOM05D005784 ORTHO05D007803 3.7e-31 139.0 150 54.0
Solyc01g068640.3 Solanum lycopersicum HOM05D005784 ORTHO05D007803 3.7e-31 139.0 150 54.7
TPR.G3030 Trifolium pratense HOM05D005784 ORTHO05D007803 3.7e-31 139.0 157 53.5
Ca_10232_v3 Cicer arietinum L. HOM05D005784 ORTHO05D007803 4.8e-31 138.7 157 52.2
Sopen01g030570 Solanum pennellii HOM05D005784 ORTHO05D007803 6.3e-31 138.3 150 54.0
DCAR_002944 Daucus carota HOM05D005784 ORTHO05D007803 1.1e-30 137.5 150 51.3
Aqoxy5G02861 Aquilegia oxysepala HOM05D005784 ORTHO05D007803 1.8e-30 136.7 150 52.0
Psat6g157920 Pisum sativum HOM05D005784 ORTHO05D007803 1.8e-30 136.7 150 54.0
EL10Ac1g01825 Beta vulgaris HOM05D005784 ORTHO05D007803 2.4e-30 136.3 150 51.3
Eucgr.A00993 Eucalyptus grandis HOM05D005784 ORTHO05D007803 3.1e-30 136.0 157 51.0
HPP92_016969 Vanilla planifolia HOM05D005784 ORTHO05D007803 5.3e-30 135.2 157 52.2
HPP92_017034 Vanilla planifolia HOM05D005784 ORTHO05D007803 5.3e-30 135.2 157 52.2
THA.LOC104815912 Tarenaya hassleriana HOM05D005784 ORTHO05D007803 6.9e-30 134.8 150 52.7
Migut.N00893 Erythranthe guttata HOM05D005784 ORTHO05D007803 9.1e-30 134.4 157 50.3
SGA_v2.0_scaffold417G51242 Striga asiatica HOM05D005784 ORTHO05D007803 9.1e-30 134.4 157 50.3
CANSAT25G3716 Cannabis sativa HOM05D005784 ORTHO05D007803 1.2e-29 134.0 157 51.0
Prupe.3G001200 Prunus persica HOM05D005784 ORTHO05D007803 1.2e-29 134.0 157 52.2
Zm00001eb340520 Zea mays HOM05D005784 ORTHO05D007803 1.2e-29 134.0 151 50.3
Medtr1g085610 Medicago truncatula HOM05D005784 ORTHO05D007803 1.5e-29 133.7 157 50.3
PSO357G0013 Papaver somniferum HOM05D005784 ORTHO05D007803 2.0e-29 133.3 142 51.4
Lalb_Chr02g0147261 Lupinus albus HOM05D005784 ORTHO05D007803 2.6e-29 132.9 157 51.6
Sc05g0000040 Simmondsia chinensis HOM05D005784 ORTHO05D007803 2.6e-29 132.9 150 50.0
PSO170G5067 Papaver somniferum HOM05D005784 ORTHO05D007803 3.4e-29 132.5 142 50.7
MSTRG.18053 Avicennia marina HOM05D005784 ORTHO05D007803 4.5e-29 132.1 157 50.3
FAN23G2435 Fragaria x ananassa HOM05D005784 ORTHO05D007803 5.9e-29 131.7 158 50.0
RcHm_v2.0_Chr3g0485611 Rosa chinensis HOM05D005784 ORTHO05D007803 1.3e-28 130.6 158 50.0
FvH4_1g26110 Fragaria vesca HOM05D005784 ORTHO05D007803 1.7e-28 130.2 158 50.0
FAN19G2824 Fragaria x ananassa HOM05D005784 ORTHO05D007803 1.7e-28 130.2 158 50.0
Aa31LG5G1370 Aethionema arabicum HOM05D005784 ORTHO05D007803 3.8e-28 129.0 142 49.3
AUR62043318 Chenopodium quinoa HOM05D005784 ORTHO05D007803 3.8e-28 129.0 157 49.7
FAN26G0124 Fragaria x ananassa HOM05D005784 ORTHO05D007803 3.8e-28 129.0 158 49.4
ATR0693G326 Amborella trichopoda HOM05D005784 ORTHO05D007803 5.0e-28 128.6 150 53.3
unitig_90.g27449 Utricularia gibba HOM05D001090 ORTHO05D007803 6.5e-28 128.3 150 50.7
SEGI_05697 Sequoiadendron giganteum HOM05D005784 ORTHO05D007803 1.1e-27 127.5 153 50.3
Nn4g25319 Nelumbo nucifera HOM05D005784 ORTHO05D007803 3.2e-27 125.9 157 51.6
CDE09G0629 Ceratophyllum demersum HOM05D005784 ORTHO05D007803 9.4e-27 124.4 151 45.7
AUR62035184 Chenopodium quinoa HOM05D005784 ORTHO05D007803 6.1e-26 121.7 149 49.7
Aqoxy2G02413 Aquilegia oxysepala HOM05D005784 ORTHO05D007803 7.9e-26 121.3 153 46.4
SHI19972 Sapria himalayana HOM05D005784 ORTHO05D000023 8.8e-25 117.9 191 40.8
Mapoly0064s0089 Marchantia polymorpha HOM05D005784 ORTHO05D007803 1.1e-24 117.5 156 44.9
A09p01190 Brassica napus HOM05D005784 ORTHO05D007803 2.2e-23 113.2 161 42.9
BcaB01g02124 Brassica carinata HOM05D005784 ORTHO05D007803 2.8e-23 112.8 151 45.0
BolC9t53062H Brassica oleracea HOM05D005784 ORTHO05D007803 4.8e-23 112.1 151 44.4
BraA09t35789Z Brassica rapa HOM05D005784 ORTHO05D007803 6.3e-23 111.7 151 44.4
Carub.0006s3555 Capsella rubella HOM05D005784 ORTHO05D007803 1.1e-22 110.9 151 43.7
BcaC04g24079 Brassica carinata HOM05D005784 ORTHO05D007803 1.4e-22 110.5 151 44.4
C09p01280 Brassica napus HOM05D005784 ORTHO05D007803 1.4e-22 110.5 151 44.4
Sp6g01550 Schrenkiella parvula HOM05D005784 ORTHO05D007803 1.8e-22 110.2 151 44.4
AL6G51690 Arabidopsis lyrata HOM05D005784 ORTHO05D007803 4.1e-22 109.0 151 43.7
Thhalv10028510m.g Eutrema salsugineum HOM05D005784 ORTHO05D007803 4.1e-22 109.0 151 43.7
Oeu052593.2 Olea europaea HOM05D005784 ORTHO05D007803 5.3e-22 108.6 288 34.0
AT4G01660 Arabidopsis thaliana HOM05D005784 ORTHO05D007803 5.9e-21 105.1 151 42.4
CARHR250010 Cardamine hirsuta HOM05D005784 ORTHO05D007803 1.0e-20 104.4 151 41.7
Pp3c6_18430 Physcomitrium patens HOM05D005784 ORTHO05D007803 1.5e-19 100.5 156 40.4
SMO146G0128 Selaginella moellendorffii HOM05D005784 ORTHO05D007803 1.9e-19 100.1 156 41.0
Cpa.g.sc57.41 Carica papaya HOM05D005784 ORTHO05D007803 9.4e-19 97.8 56 83.9
AagrBONN_evm.TU.Sc2ySwM_228.4566 Anthoceros agrestis HOM05D005784 ORTHO05D007803 2.1e-18 96.7 156 39.7
CDE09G1340 Ceratophyllum demersum HOM05D005784 ORTHO05D007803 1.8e-17 93.6 149 40.3
FAN28G2925 Fragaria x ananassa HOM05D005784 ORTHO05D007803 1.2e-16 90.9 51 84.3
ClCG11G000360 Citrullus lanatus HOM05D005784 ORTHO05D007803 4.4e-16 89.0 129 46.5
Migut.N00895 Erythranthe guttata HOM05D005784 ORTHO05D007803 1.3e-15 87.4 131 38.9
Migut.D00007 Erythranthe guttata HOM05D005784 ORTHO05D007803 2.8e-15 86.3 51 82.4
CAN.G179.27 Capsicum annuum HOM05D005784 ORTHO05D007803 3.7e-15 85.9 54 79.6
Cpa.g.sc57.42 Carica papaya HOM05D005784 ORTHO05D007803 1.6e-13 80.5 65 66.2
DCAR_005399 Daucus carota HOM05D005784 ORTHO05D007803 5.9e-13 78.6 123 41.5
Cre10.g429800 Chlamydomonas reinhardtii HOM05D005784 ORTHO05D007803 3.8e-12 75.9 157 34.4
CBR_g37217 Chara braunii HOM05D005784 ORTHO05D007803 9.4e-11 71.2 173 28.3
Migut.N00894 Erythranthe guttata HOM05D005784 ORTHO05D007803 9.4e-11 71.2 138 34.1
CiPaw.07G126900 Carya illinoinensis HOM05D005784 ORTHO05D019705 2.3e-09 66.6 34 85.3
Haze_26301 Corylus avellana HOM05D005784 ORTHO05D007803 2.3e-09 66.6 148 29.7
MCO09G446 Micromonas commoda HOM05D005784 ORTHO05D007803 3.0e-09 66.2 145 33.8
PRCOL_00004655 Prasinoderma coloniale HOM05D005784 ORTHO05D007803 2.2e-07 60.1 52 53.8
Cfa022580 Carpinus fangiana HOM05D005784 ORTHO05D007803 4.8e-07 58.9 150 32.0


User provided reference genes

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