Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041460 Camellia sinensis var. sinensis HOM05D000255 ORTHO05D113338 9.5e-30 132.9 69 100.0
Gorai.007G372500 Gossypium raimondii HOM05D000255 ORTHO05D001116 7.9e-08 60.1 48 66.7
CANSAT80G1155 Cannabis sativa HOM05D000255 ORTHO05D001116 1.8e-07 58.9 62 51.6
Gohir.D11G342500 Gossypium hirsutum HOM05D000255 ORTHO05D001116 2.3e-07 58.5 48 64.6
Ca_08898_v3 Cicer arietinum L. HOM05D000255 ORTHO05D001116 6.7e-07 57.0 61 50.8
Lalb_Chr21g0315101 Lupinus albus HOM05D000255 ORTHO05D001116 6.7e-07 57.0 46 60.9
TWI74G0278 Tripterygium wilfordii HOM05D000255 ORTHO05D001116 6.7e-07 57.0 62 51.6
CSS0001828 Camellia sinensis var. sinensis HOM05D000255 ORTHO05D001116 8.7e-07 56.6 46 63.0
arahy.Tifrunner.gnm1.ann1.6BY8XD Arachis hypogaea HOM05D000255 ORTHO05D001116 1.1e-06 56.2 46 63.0
ClCG10G019880 Citrullus lanatus HOM05D000255 ORTHO05D001116 1.1e-06 56.2 62 50.0
MELO3C009380.2 Cucumis melo HOM05D000255 ORTHO05D001116 1.1e-06 56.2 62 50.0
CsaV3_3G036220 Cucumis sativus L. HOM05D000255 ORTHO05D001116 1.1e-06 56.2 62 50.0
Eucgr.K02437 Eucalyptus grandis HOM05D000255 ORTHO05D001116 1.1e-06 56.2 46 63.0
RhsimUnG0067700 Rhododendron simsii HOM05D000255 ORTHO05D001116 1.1e-06 56.2 49 57.1
Actinidia32477 Actinidia chinensis HOM05D000255 ORTHO05D001116 1.5e-06 55.8 46 63.0
Cpa.g.sc5.161 Carica papaya HOM05D000255 ORTHO05D001116 1.5e-06 55.8 46 63.0
Hma1.2p1_0547F.1_g176520 Hydrangea macrophylla HOM05D000255 ORTHO05D001116 1.5e-06 55.8 46 63.0
TWI53G1800 Tripterygium wilfordii HOM05D000255 ORTHO05D001116 1.5e-06 55.8 46 63.0
Phvul.001G181300 Phaseolus vulgaris HOM05D000255 ORTHO05D001116 1.9e-06 55.5 46 60.9
arahy.Tifrunner.gnm1.ann1.3BKB6J Arachis hypogaea HOM05D000255 ORTHO05D001116 2.5e-06 55.1 46 60.9
Glyma.03G186200 Glycine max HOM05D000255 ORTHO05D001116 2.5e-06 55.1 46 60.9
Glyma.19G186300 Glycine max HOM05D000255 ORTHO05D001116 2.5e-06 55.1 46 60.9
Medtr1g062760 Medicago truncatula HOM05D000255 ORTHO05D001116 2.5e-06 55.1 46 60.9
Atru.chr8.1748 Acer truncatum HOM05D000255 ORTHO05D001116 3.3e-06 54.7 46 60.9
Dinv35814 Davidia involucrata HOM05D000255 ORTHO05D001116 3.3e-06 54.7 46 60.9
Dinv37338 Davidia involucrata HOM05D000255 ORTHO05D001116 3.3e-06 54.7 46 60.9
PGR004G2040 Punica granatum HOM05D000255 ORTHO05D001116 3.3e-06 54.7 46 63.0
THA.LOC104816361 Tarenaya hassleriana HOM05D000255 ORTHO05D001116 3.3e-06 54.7 46 63.0
vmacro07319 Vaccinium macrocarpon HOM05D000255 ORTHO05D001116 3.3e-06 54.7 48 62.5
Glyma.10G059900 Glycine max HOM05D000255 ORTHO05D001116 4.3e-06 54.3 46 60.9
Psat6g075960 Pisum sativum HOM05D000255 ORTHO05D001116 4.3e-06 54.3 46 60.9
Hund15208 Selenicereus undatus HOM05D000255 ORTHO05D001116 4.3e-06 54.3 62 48.4
Haze_19435 Corylus avellana HOM05D000255 ORTHO05D001116 5.6e-06 53.9 61 49.2
Glyma.13G146600 Glycine max HOM05D000255 ORTHO05D001116 5.6e-06 53.9 46 60.9
Phvul.007G151900 Phaseolus vulgaris HOM05D000255 ORTHO05D001116 5.6e-06 53.9 46 60.9
Sc20g0005680 Simmondsia chinensis HOM05D000255 ORTHO05D001116 5.6e-06 53.9 46 58.7
TAR633G0791 Trochodendron aralioides HOM05D000255 ORTHO05D001116 5.6e-06 53.9 62 50.0
VMungo0720G2937 Vigna mungo HOM05D000255 ORTHO05D001116 5.6e-06 53.9 46 60.9
GSVIVG01033681001 Vitis vinifera HOM05D000255 ORTHO05D001116 5.6e-06 53.9 46 60.9
Ciclev10012751m.g Citrus clementina HOM05D000255 ORTHO05D001116 7.4e-06 53.5 46 58.7
Haze_19433 Corylus avellana HOM05D000255 ORTHO05D001116 7.4e-06 53.5 61 49.2
Lj3A990T75 Lonicera japonica HOM05D000255 ORTHO05D001116 7.4e-06 53.5 46 58.7
RhsimUnG0004300 Rhododendron simsii HOM05D000255 ORTHO05D001116 7.4e-06 53.5 44 59.1
AL3G21150 Arabidopsis lyrata HOM05D000255 ORTHO05D001116 9.6e-06 53.1 46 65.2
AT3G09910 Arabidopsis thaliana HOM05D000255 ORTHO05D001116 9.6e-06 53.1 46 65.2
arahy.Tifrunner.gnm1.ann1.A2V3CL Arachis hypogaea HOM05D000255 ORTHO05D001116 9.6e-06 53.1 44 61.4
arahy.Tifrunner.gnm1.ann1.M8CBSZ Arachis hypogaea HOM05D000255 ORTHO05D001116 9.6e-06 53.1 44 61.4
Carub.0003s0901 Capsella rubella HOM05D000255 ORTHO05D001116 9.6e-06 53.1 46 65.2
Sp3g08260 Schrenkiella parvula HOM05D000255 ORTHO05D001116 9.6e-06 53.1 46 65.2
TPR.G21018 Trifolium pratense HOM05D000255 ORTHO05D001116 9.6e-06 53.1 44 61.4
VMungo1383G1349 Vigna mungo HOM05D000255 ORTHO05D001116 9.6e-06 53.1 46 58.7


User provided reference genes

Program Settings