Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.1e-59 229.9 109 100.0
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.2e-33 145.6 108 59.3
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.8e-33 144.8 108 58.3
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-32 142.9 108 57.4
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.5e-32 141.0 108 56.5
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.4e-32 140.2 108 57.4
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.0e-30 136.7 108 57.4
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 3.5e-26 121.7 108 50.0
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 2.3e-25 119.0 108 48.1
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 2.3e-25 119.0 108 49.1
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 3.8e-25 118.2 108 49.1
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 8.6e-25 117.1 108 48.1
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-24 115.9 108 47.2
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 3.6e-23 111.7 108 46.3
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.7e-23 111.3 83 60.2
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.4e-22 109.8 88 55.7
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-22 109.0 88 55.7
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-22 109.0 88 55.7
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.3e-22 109.0 83 59.0
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.0e-22 108.2 83 56.6
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.8e-22 107.5 83 56.6
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.8e-22 107.5 88 54.5
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.8e-22 107.5 106 42.5
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.9e-22 107.1 106 42.5
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-21 106.3 79 51.9
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.0e-21 105.9 83 55.4
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.0e-21 105.9 83 55.4
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.0e-21 105.9 106 41.5
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.0e-21 105.9 107 46.7
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.6e-21 105.5 110 41.8
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.4e-21 105.1 83 55.4
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.4e-21 105.1 106 41.5
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.7e-21 104.4 106 40.6
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-20 103.2 83 54.2
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.3e-20 100.5 83 53.0
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.3e-20 100.5 83 54.2
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-19 99.8 106 40.6
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 7.0e-19 97.4 81 50.6
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.9e-18 94.4 126 36.5
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.8e-17 91.7 110 36.4
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.1e-16 90.1 92 47.8
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-16 90.1 70 50.0
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-16 89.7 82 52.4
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.5e-16 89.7 84 42.9
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-16 89.4 109 45.0
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 2.5e-16 89.0 109 45.0
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-16 88.2 84 41.7
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 4.3e-16 88.2 109 45.0
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-15 85.5 74 54.1
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.8e-15 85.5 74 44.6
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-15 85.5 109 44.0
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 4.7e-15 84.7 107 43.9
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.0e-14 83.6 73 42.5
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 3.4e-13 78.6 109 40.4
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 3.4e-13 78.6 118 38.1
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.4e-13 78.2 73 39.7
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 5.8e-13 77.8 65 50.8
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-12 76.6 118 37.3
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-12 76.3 96 35.4
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-12 76.3 118 38.1
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-12 76.3 104 35.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-12 75.9 118 38.1
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-12 75.1 116 37.1
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 3.7e-12 75.1 102 35.3
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-12 74.7 117 37.6
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 6.4e-12 74.3 111 40.5
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 6.4e-12 74.3 65 47.7
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 8.3e-12 73.9 111 38.7
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 8.3e-12 73.9 102 35.3
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-12 73.9 102 35.3
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.1e-11 73.6 103 35.0
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 1.9e-11 72.8 96 39.6
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 1.9e-11 72.8 102 34.3
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-11 72.0 94 35.1
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.1e-11 71.6 66 42.4
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 4.1e-11 71.6 102 34.3
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 4.1e-11 71.6 102 33.3
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 7.0e-11 70.9 105 38.1
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 9.2e-11 70.5 102 34.3
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 6.0e-10 67.8 104 33.7
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 7.8e-10 67.4 105 33.3
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 1.3e-09 66.6 106 34.0
PSO170G1977 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-09 65.1 99 37.4
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-08 61.6 64 40.6
Psat1g057080 Pisum sativum HOM05D007230 ORTHO05D004756 4.3e-08 61.6 56 48.2
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 7.3e-08 60.8 88 30.7
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 1.6e-07 59.7 103 31.1
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-07 58.9 102 33.3
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 3.6e-07 58.5 96 36.5
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 3.1e-06 55.5 47 51.1
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-06 54.3 95 33.7
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 8.9e-06 53.9 74 40.5
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 8.9e-06 53.9 81 32.1


User provided reference genes

Program Settings