Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 9.3e-104 380.2 187 100.0
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.0e-86 323.6 178 91.6
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.6e-74 282.3 178 83.1
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 4.2e-72 275.0 178 78.7
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 2.7e-71 272.3 178 77.0
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 8.8e-70 267.3 178 75.3
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 2.8e-68 262.3 178 75.3
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 5.5e-64 248.1 178 69.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 1.2e-63 246.9 178 68.5
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 2.7e-63 245.7 178 68.0
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 2.7e-63 245.7 178 71.9
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 5.2e-62 241.5 178 69.1
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 2.0e-61 239.6 178 66.3
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 4.4e-61 238.4 178 64.6
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 4.4e-61 238.4 178 67.4
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.7e-60 236.5 178 66.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 2.2e-60 236.1 178 66.3
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 3.7e-60 235.3 178 65.2
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 4.8e-60 235.0 178 65.7
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 6.3e-60 234.6 178 65.7
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 8.2e-60 234.2 178 65.7
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 8.2e-60 234.2 178 65.7
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.4e-59 233.4 178 65.7
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.1e-59 232.3 178 64.6
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 5.3e-59 231.5 178 64.6
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 7.0e-59 231.1 178 62.9
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 7.0e-59 231.1 175 67.4
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 9.1e-59 230.7 178 64.6
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 2.0e-58 229.6 178 64.0
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 2.0e-58 229.6 178 63.5
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 2.0e-58 229.6 178 63.5
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 4.5e-58 228.4 179 63.1
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.2e-57 226.1 179 63.1
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 2.9e-57 225.7 179 63.1
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 3.8e-57 225.3 178 62.9
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 5.0e-57 224.9 178 63.5
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 5.0e-57 224.9 179 63.1
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 5.0e-57 224.9 179 63.1
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 6.5e-57 224.6 178 63.5
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 6.5e-57 224.6 178 63.5
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 8.5e-57 224.2 178 65.2
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 5.5e-56 221.5 178 62.4
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 7.2e-56 221.1 178 62.4
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 9.4e-56 220.7 178 64.0
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.2e-55 220.3 178 61.8
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-55 219.9 178 61.2
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.7e-55 219.2 178 61.8
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.6e-55 218.8 178 64.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 4.7e-55 218.4 178 61.8
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 4.7e-55 218.4 178 62.4
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 6.1e-55 218.0 178 63.5
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.1e-55 218.0 178 61.8
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 8.0e-55 217.6 178 64.0
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 8.0e-55 217.6 178 63.5
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 8.0e-55 217.6 178 56.7
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.0e-54 217.2 178 61.2
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.8e-54 216.5 178 62.9
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 3.0e-54 215.7 178 61.2
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 5.2e-54 214.9 178 59.0
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 5.2e-54 214.9 178 60.1
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 8.8e-54 214.2 178 64.0
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 8.8e-54 214.2 178 64.0
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 2.0e-53 213.0 178 61.2
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.0e-53 213.0 178 60.7
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 7.5e-53 211.1 178 59.6
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 2.2e-52 209.5 179 62.0
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 8.3e-52 207.6 179 62.0
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.4e-51 206.1 178 56.2
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 3.1e-51 205.7 175 58.3
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 3.1e-51 205.7 179 59.2
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 4.1e-51 205.3 179 59.2
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 7.0e-51 204.5 178 56.7
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.6e-50 203.4 179 59.8
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.5e-50 202.2 175 60.0
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 4.5e-50 201.8 175 58.3
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 5.9e-50 201.4 178 58.4
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 5.9e-50 201.4 175 58.3
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 5.9e-50 201.4 179 59.8
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.3e-49 200.3 161 59.0
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 5.0e-49 198.4 175 59.4
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 5.0e-49 198.4 171 59.6
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.5e-48 196.8 175 58.9
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 4.2e-48 195.3 179 56.4
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 7.2e-48 194.5 179 55.9
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 3.6e-47 192.2 175 57.1
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 4.7e-47 191.8 178 55.1
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.1e-43 178.7 179 55.9
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.1e-43 178.7 175 50.9
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 2.7e-42 176.0 170 61.8
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 2.7e-42 176.0 178 48.9
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 3.5e-42 175.6 178 49.4
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.0e-41 174.1 178 47.8
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 9.5e-40 167.5 122 64.8
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 4.0e-38 162.2 162 48.1
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 1.3e-36 157.1 123 59.3
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.0e-34 149.8 175 44.0
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.0e-33 147.5 105 66.7
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 6.6e-33 144.8 175 43.4
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 6.6e-33 144.8 175 38.9
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 3.3e-32 142.5 144 46.5
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.6e-31 140.2 175 41.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 2.1e-31 139.8 175 38.3
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 3.1e-30 136.0 176 37.5
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 4.0e-30 135.6 166 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 6.8e-30 134.8 175 40.6
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 2.0e-29 133.3 105 64.8
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 3.2e-27 125.9 188 38.3
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.2e-26 124.0 175 39.4
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 2.7e-26 122.9 176 39.2
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.1e-22 110.9 143 40.6
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.6e-13 79.7 70 60.0
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 7.1e-11 71.6 106 37.7


User provided reference genes

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