Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 6.7e-165 583.9 294 100.0
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 2.5e-135 485.7 295 83.7
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.2e-135 485.3 304 84.2
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 1.5e-132 476.5 298 83.2
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 5.7e-124 448.0 296 77.7
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 5.7e-124 448.0 296 77.4
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 6.3e-123 444.5 300 77.0
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.1e-122 443.7 298 77.5
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 2.4e-122 442.6 291 78.7
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 1.6e-121 439.9 299 76.9
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 4.5e-121 438.3 272 80.9
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 5.9e-121 438.0 315 73.7
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 5.9e-121 438.0 293 77.8
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 7.7e-121 437.6 318 73.6
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 1.3e-120 436.8 302 75.2
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 2.2e-120 436.0 311 74.0
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 8.5e-120 434.1 260 82.3
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 1.1e-119 433.7 285 77.9
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 1.1e-119 433.7 278 78.4
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 1.9e-119 433.0 269 80.3
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 1.9e-119 433.0 299 75.3
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 2.5e-119 432.6 299 75.6
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.5e-119 432.6 289 76.8
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 7.2e-119 431.0 279 77.4
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 7.2e-119 431.0 279 77.4
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 1.2e-118 430.3 299 74.6
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 1.6e-118 429.9 269 79.6
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 2.7e-118 429.1 301 73.4
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.7e-118 429.1 289 76.1
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 3.6e-118 428.7 313 71.9
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 8.0e-118 427.6 260 81.5
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 8.0e-118 427.6 307 73.6
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 1.0e-117 427.2 316 72.2
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 4.0e-117 425.2 307 72.6
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 1.2e-116 423.7 301 72.8
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 1.5e-116 423.3 289 75.1
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 1.3e-115 420.2 316 69.6
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.3e-115 420.2 346 65.9
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.7e-115 419.9 303 71.9
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 2.8e-115 419.1 285 76.8
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 4.8e-115 418.3 291 72.5
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 4.8e-115 418.3 300 72.7
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 1.4e-114 416.8 287 73.2
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 1.4e-114 416.8 292 71.6
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 1.8e-114 416.4 292 71.6
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 1.8e-114 416.4 292 71.6
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 1.8e-114 416.4 292 71.6
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 4.1e-114 415.2 289 71.6
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 4.1e-114 415.2 286 74.8
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 7.0e-114 414.5 291 73.9
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 7.0e-114 414.5 264 77.3
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 2.0e-113 412.9 292 70.5
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 4.5e-113 411.8 282 72.3
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 5.9e-113 411.4 298 71.8
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 1.0e-112 410.6 243 82.3
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 1.3e-112 410.2 285 74.4
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 1.3e-112 410.2 230 87.4
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 2.9e-112 409.1 296 73.6
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 5.0e-112 408.3 287 71.1
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 6.5e-112 407.9 288 70.8
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 8.5e-112 407.5 298 70.8
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.9e-111 406.4 304 70.7
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.5e-111 406.0 251 80.9
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 5.5e-111 404.8 238 81.5
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 7.2e-111 404.4 269 76.6
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 9.4e-111 404.1 275 79.6
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 2.1e-110 402.9 302 71.2
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 2.7e-110 402.5 297 68.7
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 2.7e-110 402.5 268 76.5
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 6.1e-110 401.4 230 84.8
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 1.4e-109 400.2 298 71.1
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 1.8e-109 399.8 288 70.1
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 6.8e-109 397.9 277 75.1
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 2.0e-108 396.4 272 75.0
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 2.2e-107 392.9 293 68.3
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 2.2e-107 392.9 243 77.8
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 7.0e-106 387.9 273 69.6
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 1.9e-103 379.8 290 68.3
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 5.6e-103 378.3 239 77.0
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 9.5e-103 377.5 256 73.8
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 3.6e-102 375.6 239 77.4
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 1.0e-101 374.0 223 80.7
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 1.0e-101 374.0 295 66.8
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 7.5e-100 367.9 308 66.2
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 1.1e-98 364.0 269 73.2
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 1.1e-98 364.0 271 72.3
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 4.1e-98 362.1 291 65.3
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 5.4e-98 361.7 259 71.0
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 3.9e-96 355.5 243 72.8
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 3.3e-95 352.4 308 59.7
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 1.5e-92 343.6 240 69.6
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 4.9e-91 338.6 243 70.4
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 1.5e-87 327.0 250 68.0
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 1.9e-82 310.1 209 76.6
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 2.4e-82 309.7 264 59.5
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 1.1e-79 300.8 264 59.5
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 4.3e-79 298.9 226 69.5
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 5.4e-74 282.0 193 71.5
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 3.5e-73 279.3 182 73.1
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 3.3e-71 272.7 221 65.6
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 5.8e-68 261.9 198 72.2
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 1.4e-66 257.3 308 52.3
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 3.2e-58 229.6 243 51.9
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 1.0e-56 224.6 171 70.2
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 2.0e-52 210.3 249 55.4
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 1.1e-50 204.5 113 85.8
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 9.3e-50 201.4 115 82.6
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 6.5e-43 178.7 111 80.2
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 8.7e-40 168.3 232 42.2
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 7.2e-34 148.7 221 41.6
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 3.9e-32 142.9 77 88.3
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 5.3e-21 105.9 210 35.2
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 5.9e-20 102.4 239 33.5
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.9e-18 97.4 63 77.8
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 1.2e-09 68.2 91 47.3
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 4.7e-09 66.2 205 31.2
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 3.3e-07 60.1 33 72.7
DCAR_006105 Daucus carota HOM05D006935 ORTHO05D008944 8.2e-06 55.5 32 81.2


User provided reference genes

Program Settings