Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 3.3e-62 241.5 121 100.0
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 2.8e-61 238.4 121 98.3
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 5.0e-42 174.5 128 68.0
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 5.5e-41 171.0 141 62.4
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 2.7e-35 152.1 122 64.8
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 6.1e-32 141.0 122 62.3
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 1.3e-29 133.3 122 55.7
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 4.9e-29 131.3 122 56.6
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 1.1e-28 130.2 121 54.5
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 3.2e-28 128.6 122 52.5
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 2.7e-27 125.6 122 54.1
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 3.5e-27 125.2 119 55.5
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 5.9e-27 124.4 111 52.3
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 1.5e-25 119.8 121 51.2
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 2.5e-25 119.0 120 55.8
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 3.3e-25 118.6 123 49.6
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 1.2e-24 116.7 120 49.2
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 1.6e-24 116.3 119 52.1
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 2.8e-24 115.5 122 51.6
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 4.7e-24 114.8 137 45.3
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 8.0e-24 114.0 137 45.3
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 3.1e-23 112.1 162 43.2
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 5.2e-23 111.3 110 54.5
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 8.9e-23 110.5 122 45.9
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 2.6e-22 109.0 123 47.2
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 2.6e-22 109.0 136 44.1
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 3.4e-22 108.6 122 42.6
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 3.4e-22 108.6 118 49.2
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 3.4e-22 108.6 122 43.4
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 7.5e-22 107.5 137 43.1
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 9.8e-22 107.1 122 44.3
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.3e-21 106.7 137 43.1
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 3.7e-21 105.1 122 46.7
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 3.7e-21 105.1 121 48.8
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 4.9e-21 104.8 123 45.5
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.1e-20 103.6 125 42.4
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.4e-20 103.2 137 42.3
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 1.9e-20 102.8 122 49.2
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 1.9e-20 102.8 122 45.1
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 3.2e-20 102.1 122 43.4
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 3.2e-20 102.1 137 41.6
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 4.1e-20 101.7 122 47.5
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 5.4e-20 101.3 112 49.1
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 7.0e-20 100.9 137 40.9
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 7.0e-20 100.9 122 44.3
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 9.2e-20 100.5 122 44.3
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 2.0e-19 99.4 120 47.5
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 2.7e-19 99.0 123 43.1
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 3.5e-19 98.6 122 41.8
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 4.6e-19 98.2 121 46.3
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 4.6e-19 98.2 93 52.7
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 4.6e-19 98.2 107 48.6
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 7.8e-19 97.4 123 42.3
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 1.7e-18 96.3 121 43.8
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 5.0e-18 94.7 128 41.4
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 1.1e-17 93.6 123 40.7
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 1.9e-17 92.8 120 45.8
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 2.5e-17 92.4 99 44.4
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 2.5e-17 92.4 74 60.8
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 2.5e-17 92.4 133 44.4
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 3.3e-17 92.0 120 44.2
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 9.5e-17 90.5 128 35.9
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 2.8e-16 89.0 132 36.4
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 2.8e-16 89.0 129 39.5
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 4.7e-16 88.2 123 41.5
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 6.2e-16 87.8 132 35.6
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 8.1e-16 87.4 120 43.3
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 1.4e-15 86.7 132 37.9
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 1.4e-15 86.7 120 42.5
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 1.8e-15 86.3 123 41.5
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 2.3e-15 85.9 132 35.6
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 3.1e-15 85.5 132 38.6
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 3.1e-15 85.5 122 39.3
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 4.0e-15 85.1 132 37.1
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 5.2e-15 84.7 132 37.9
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 5.2e-15 84.7 132 34.8
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 1.5e-14 83.2 132 37.9
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 1.5e-14 83.2 121 38.8
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 2.6e-14 82.4 124 40.3
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 3.4e-14 82.0 124 39.5
Sopen06g033710 Solanum pennellii HOM05D007204 ORTHO05D008593 4.4e-14 81.6 84 50.0
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 5.8e-14 81.3 109 40.4
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 7.5e-14 80.9 126 38.1
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 6.4e-13 77.8 133 35.3
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 1.1e-12 77.0 122 39.3
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 1.4e-12 76.6 121 36.4
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 4.1e-12 75.1 156 30.8
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 9.2e-12 73.9 153 32.0
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 9.2e-12 73.9 156 31.4
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 1.6e-11 73.2 74 51.4
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 1.0e-10 70.5 105 38.1
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 1.3e-10 70.1 122 36.1
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 1.7e-10 69.7 105 38.1
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 2.3e-10 69.3 73 47.9
Dinv28687 Davidia involucrata HOM05D007204 ORTHO05D008593 5.1e-10 68.2 48 62.5
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 6.6e-10 67.8 73 45.2
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 2.1e-08 62.8 75 46.7
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 2.8e-08 62.4 121 35.5
Ca_05090_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 6.2e-08 61.2 89 39.3
Ca_14995_v3 Cicer arietinum L. HOM05D007204 ORTHO05D008593 6.2e-08 61.2 89 39.3
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 6.2e-08 61.2 102 38.2
SEGI_02179 Sequoiadendron giganteum HOM05D056589 ORTHO05D008593 2.6e-06 55.8 114 34.2
Zm00001eb025660 Zea mays HOM05D007204 ORTHO05D008593 9.9e-06 53.9 91 36.3


User provided reference genes

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