Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 2.3e-51 205.3 103 100.0
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 2.3e-51 205.3 103 100.0
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 9.5e-42 173.3 102 86.3
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 9.5e-42 173.3 102 86.3
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 9.5e-42 173.3 102 86.3
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 1.6e-41 172.6 101 85.1
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 2.8e-41 171.8 102 86.3
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 2.8e-41 171.8 101 85.1
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 2.8e-41 171.8 104 86.5
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 2.8e-41 171.8 102 86.3
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 3.6e-41 171.4 102 85.3
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 3.6e-41 171.4 101 86.1
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 3.6e-41 171.4 101 85.1
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 4.7e-41 171.0 102 86.3
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 4.7e-41 171.0 102 85.3
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 6.2e-41 170.6 100 84.0
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 1.4e-40 169.5 103 86.4
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 1.8e-40 169.1 102 84.3
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 4.0e-40 167.9 101 84.2
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 8.9e-40 166.8 102 82.4
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 1.2e-39 166.4 101 82.2
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 1.2e-39 166.4 102 82.4
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 1.5e-39 166.0 102 85.3
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 1.5e-39 166.0 101 85.1
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 1.5e-39 166.0 101 85.1
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 2.0e-39 165.6 103 83.5
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 81.0
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 2.6e-39 165.2 101 82.2
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 4.4e-39 164.5 100 81.0
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 4.4e-39 164.5 101 86.1
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 4.4e-39 164.5 105 80.0
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 5.8e-39 164.1 101 84.2
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 5.8e-39 164.1 102 82.4
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 7.5e-39 163.7 100 80.0
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 7.5e-39 163.7 99 82.8
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 9.8e-39 163.3 101 83.2
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 9.8e-39 163.3 102 80.4
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 9.8e-39 163.3 105 82.9
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.3e-38 162.9 104 80.8
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 1.3e-38 162.9 102 80.4
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 2.2e-38 162.2 102 80.4
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 2.2e-38 162.2 102 80.4
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 2.2e-38 162.2 102 80.4
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 2.2e-38 162.2 101 82.2
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 2.9e-38 161.8 101 80.2
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 3.7e-38 161.4 101 81.2
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 3.7e-38 161.4 104 79.8
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 4.9e-38 161.0 102 79.4
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 4.9e-38 161.0 101 81.2
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 4.9e-38 161.0 101 81.2
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 6.4e-38 160.6 104 79.8
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 8.3e-38 160.2 99 81.8
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 8.3e-38 160.2 99 82.8
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 8.3e-38 160.2 105 81.0
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 1.1e-37 159.8 101 79.2
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-37 159.8 103 79.6
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.1e-37 159.8 101 80.2
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 1.1e-37 159.8 102 79.4
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 1.1e-37 159.8 101 81.2
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 1.1e-37 159.8 101 81.2
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 1.9e-37 159.1 102 79.4
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 1.9e-37 159.1 102 79.4
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 2.4e-37 158.7 106 78.3
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 2.4e-37 158.7 99 80.8
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 2.4e-37 158.7 101 79.2
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 2.4e-37 158.7 102 81.4
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 3.2e-37 158.3 102 80.4
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 3.2e-37 158.3 102 80.4
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 9.2e-37 156.8 99 81.8
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 9.2e-37 156.8 101 80.2
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 9.2e-37 156.8 101 78.2
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 9.2e-37 156.8 101 78.2
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 1.2e-36 156.4 93 86.0
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 1.6e-36 156.0 101 81.2
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 2.7e-36 155.2 101 77.2
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 3.5e-36 154.8 99 79.8
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 4.6e-36 154.5 101 76.2
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 6.0e-36 154.1 101 82.2
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 6.0e-36 154.1 101 78.2
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 1.3e-35 152.9 104 75.0
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 1.7e-35 152.5 101 76.2
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 3.0e-35 151.8 102 78.4
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 3.0e-35 151.8 102 78.4
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 3.0e-35 151.8 100 77.0
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 3.0e-35 151.8 99 76.8
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 3.9e-35 151.4 102 78.4
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 5.1e-35 151.0 102 75.5
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 5.1e-35 151.0 102 78.4
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 5.1e-35 151.0 102 78.4
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 5.1e-35 151.0 98 78.6
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 6.6e-35 150.6 103 74.8
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 8.6e-35 150.2 102 75.5
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 8.6e-35 150.2 102 77.5
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 1.1e-34 149.8 101 77.2
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 2.5e-34 148.7 103 75.7
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.5e-34 148.7 102 73.5
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.5e-34 148.7 102 73.5
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 4.3e-34 147.9 99 77.8
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 7.3e-34 147.1 103 73.8
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 4.7e-33 144.4 90 78.9
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 8.1e-33 143.7 90 78.9
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 8.1e-33 143.7 90 78.9
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 5.2e-32 141.0 101 72.3
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 8.9e-32 140.2 96 75.0
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 1.2e-31 139.8 93 76.3
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 1.2e-31 139.8 96 75.0
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.6e-31 138.7 94 77.7
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 4.4e-31 137.9 103 71.8
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 9.9e-31 136.7 72 90.3
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 3.2e-29 131.7 88 72.7
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 7.1e-29 130.6 97 69.1
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 3.9e-27 124.8 68 86.8
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 1.9e-26 122.5 68 85.3
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 2.8e-25 118.6 85 68.2
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 1.9e-21 105.9 70 70.0
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 2.7e-20 102.1 73 63.0
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 7.8e-20 100.5 75 60.0
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 3.0e-19 98.6 102 59.8
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 2.5e-18 95.5 64 65.6
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 5.6e-18 94.4 67 71.6
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 5.6e-18 94.4 67 71.6
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 3.6e-17 91.7 56 76.8
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-16 90.1 53 79.2
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 1.1e-16 90.1 80 51.2
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 4.4e-15 84.7 62 62.9
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 7.6e-15 84.0 65 56.9
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 1.4e-13 79.7 102 52.9
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 3.4e-07 58.5 67 44.8


User provided reference genes

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