Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041323 Camellia sinensis var. sinensis HOM05D007766 ORTHO05D009733 2.8e-294 1014.6 547 100.0
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 1.2e-66 258.5 269 54.6
vmacro02422 Vaccinium macrocarpon HOM05D007766 ORTHO05D009733 1.9e-64 251.1 275 53.8
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 3.0e-62 243.8 276 51.4
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 4.1e-51 206.8 187 61.0
Haze_04998 Corylus avellana HOM05D007766 ORTHO05D009733 7.8e-50 202.6 278 46.4
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 5.0e-49 199.9 271 48.0
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 1.4e-46 191.8 273 44.7
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 1.8e-46 191.4 179 57.5
TWI36G1235 Tripterygium wilfordii HOM05D007766 ORTHO05D009733 1.2e-45 188.7 267 44.6
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 5.8e-45 186.4 178 56.7
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 2.9e-44 184.1 286 44.4
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 6.4e-44 183.0 178 56.2
CiPaw.07G114200 Carya illinoinensis HOM05D007766 ORTHO05D009733 1.1e-43 182.2 187 55.6
Sabra14G0092600 Salix brachista HOM05D007766 ORTHO05D009733 1.9e-43 181.4 265 43.0
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 2.4e-43 181.0 190 53.7
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 5.4e-43 179.9 270 41.9
QL12p028831 Quercus lobata HOM05D007766 ORTHO05D009733 1.2e-42 178.7 293 42.3
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 1.6e-42 178.3 275 45.5
RcHm_v2.0_Chr7g0241981 Rosa chinensis HOM05D007766 ORTHO05D009733 1.6e-42 178.3 194 52.1
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 1.6e-42 178.3 269 43.5
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 3.5e-42 177.2 265 44.5
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 1.0e-41 175.6 260 43.8
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 2.3e-41 174.5 192 50.0
Lj1g0002879 Lotus japonicus HOM05D007766 ORTHO05D009733 3.9e-41 173.7 269 43.5
Ca_09199_v3 Cicer arietinum L. HOM05D007766 ORTHO05D009733 5.0e-41 173.3 269 42.8
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 8.6e-41 172.6 269 43.5
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 8.6e-41 172.6 269 40.5
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 5.6e-40 169.9 168 55.4
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 9.5e-40 169.1 270 42.6
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 1.6e-39 168.3 198 48.0
Manes.05G001200 Manihot esculenta HOM05D007766 ORTHO05D009733 3.6e-39 167.2 267 41.6
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 8.1e-39 166.0 269 41.3
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 1.8e-38 164.9 271 40.6
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 4.0e-38 163.7 174 51.7
ECA248G3735 Erigeron canadensis HOM05D007766 ORTHO05D009733 4.0e-38 163.7 189 47.6
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 4.0e-38 163.7 270 41.1
Cpa.g.sc151.50 Carica papaya HOM05D007766 ORTHO05D009733 1.2e-37 162.2 268 40.7
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 1.2e-37 162.2 270 41.1
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 2.6e-37 161.0 269 42.4
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 2.6e-37 161.0 189 48.7
VMungo1383G0118 Vigna mungo HOM05D007766 ORTHO05D009733 3.4e-37 160.6 269 41.6
Cfa005851 Carpinus fangiana HOM05D007766 ORTHO05D009733 7.5e-37 159.5 274 41.6
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 7.5e-37 159.5 272 41.9
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 2.2e-36 157.9 248 42.3
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 2.2e-36 157.9 248 42.3
Lalb_Chr15g0078421 Lupinus albus HOM05D007766 ORTHO05D009733 6.4e-36 156.4 155 52.3
FAN08G1563 Fragaria x ananassa HOM05D007766 ORTHO05D009733 8.3e-36 156.0 248 41.5
Duzib138G0131 Durio zibethinus HOM05D007766 ORTHO05D009733 1.4e-35 155.2 175 48.0
FvH4_5g39680 Fragaria vesca HOM05D007766 ORTHO05D009733 4.1e-35 153.7 248 41.1
Phvul.001G211300 Phaseolus vulgaris HOM05D007766 ORTHO05D009733 4.1e-35 153.7 173 49.7
MD03G1298400 Malus domestica HOM05D007766 ORTHO05D009733 6.0e-34 149.8 269 41.6
Nn3g21607 Nelumbo nucifera HOM05D007766 ORTHO05D009733 7.8e-34 149.4 282 38.7
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 1.3e-33 148.7 194 46.9
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 2.3e-33 147.9 276 39.9
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 3.0e-33 147.5 170 51.2
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 3.9e-33 147.1 248 40.7
HanXRQChr01g0000891 Helianthus annuus HOM05D007766 ORTHO05D009733 1.5e-32 145.2 191 44.0
MELO3C015946.2 Cucumis melo HOM05D007766 ORTHO05D009733 1.9e-32 144.8 287 41.1
Sed0007654 Sechium edule HOM05D007766 ORTHO05D009733 2.5e-32 144.4 271 39.5
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 2.1e-31 141.4 247 40.1
Lsat_1_v5_gn_5_190141 Lactuca sativa HOM05D007766 ORTHO05D009733 4.7e-31 140.2 161 47.8
Prupe.8G268800 Prunus persica HOM05D007766 ORTHO05D009733 6.2e-31 139.8 172 50.0
Atru.chr5.1065 Acer truncatum HOM05D007766 ORTHO05D009733 1.1e-30 139.0 281 37.4
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 1.4e-30 138.7 162 47.5
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 4.0e-30 137.1 233 39.5
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 4.0e-30 137.1 277 38.6
TAR636G1646 Trochodendron aralioides HOM05D007766 ORTHO05D009733 4.0e-30 137.1 127 59.8
Ciclev10024028m.g Citrus clementina HOM05D007766 ORTHO05D009733 1.5e-29 135.2 151 52.3
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 9.9e-29 132.5 267 37.5
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.1e-27 129.0 240 39.6
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 1.9e-27 128.3 272 37.1
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 1.9e-27 128.3 270 37.4
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 2.1e-26 124.8 229 38.9
Aqoxy2G02831 Aquilegia oxysepala HOM05D007766 ORTHO05D009733 1.3e-25 122.1 188 39.9
MBI18_g25084_MAGBIO Magnolia biondii HOM05D007766 ORTHO05D009733 3.9e-25 120.6 186 41.4
PSO782G1382 Papaver somniferum HOM05D007766 ORTHO05D009733 1.9e-24 118.2 201 39.8
PSO478G3523 Papaver somniferum HOM05D007766 ORTHO05D009733 3.3e-24 117.5 201 39.3
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 3.4e-21 107.5 270 35.2
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 1.7e-20 105.1 165 41.8
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 6.4e-20 103.2 241 36.5
unitig_60.g25659 Utricularia gibba HOM05D001839 ORTHO05D001867 2.4e-19 101.3 100 58.0
Actinidia21421 Actinidia chinensis HOM05D007766 ORTHO05D009733 1.7e-17 95.1 160 41.9
CDE05G0244 Ceratophyllum demersum HOM05D007766 ORTHO05D009733 3.6e-15 87.4 170 35.3
Solyc09g075600.3 Solanum lycopersicum HOM05D007766 ORTHO05D009733 4.8e-15 87.0 78 55.1
Medtr8g023290 Medicago truncatula HOM05D007766 ORTHO05D009733 2.7e-10 71.2 107 43.9
Zm00001eb330520 Zea mays HOM05D007766 ORTHO05D009733 7.9e-10 69.7 188 36.7
CSS0008743 Camellia sinensis var. sinensis HOM05D018679 ORTHO05D112294 3.7e-07 60.8 46 69.6
AUR62008743 Chenopodium quinoa HOM05D007766 ORTHO05D009733 3.7e-07 60.8 129 34.1
Sc17g0002980 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.8e-06 58.5 41 68.3


User provided reference genes

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