Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 5.6e-156 554.3 289 100.0
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.0e-154 550.1 289 99.7
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 9.2e-42 174.9 358 42.5
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 2.8e-38 163.3 362 40.6
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 8.6e-24 115.2 327 36.7
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 5.6e-23 112.5 339 36.3
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 9.5e-23 111.7 331 34.1
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 4.7e-22 109.4 344 35.8
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 6.2e-22 109.0 344 35.5
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 1.7e-19 100.9 340 33.2
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 2.4e-18 97.1 307 32.9
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 9.2e-18 95.1 296 32.8
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 3.5e-17 93.2 327 33.9
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 6.0e-17 92.4 350 33.1
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 3.9e-16 89.7 339 31.3
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 5.1e-16 89.4 316 33.2
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 2.8e-14 83.6 324 30.2
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 3.6e-14 83.2 292 31.2
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 3.6e-14 83.2 324 30.2
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 4.0e-13 79.7 285 31.2
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 1.7e-11 74.3 328 31.4
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 3.8e-11 73.2 194 37.6
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 8.4e-11 72.0 215 34.9
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.1e-10 71.6 235 34.0
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 1.1e-10 71.6 215 33.5
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 3.2e-10 70.1 144 38.9
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 5.4e-10 69.3 306 26.8
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 5.4e-10 69.3 328 31.7
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 9.3e-10 68.6 175 36.0
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 9.3e-10 68.6 330 32.4
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 1.6e-09 67.8 301 32.9
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 2.1e-09 67.4 144 36.8
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 3.5e-09 66.6 193 36.8
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 3.5e-09 66.6 300 31.0
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 7.8e-09 65.5 128 41.4
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 7.8e-09 65.5 268 29.5
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 1.0e-08 65.1 312 31.1
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 8.7e-08 62.0 288 29.5
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 2.5e-07 60.5 355 28.7
CAN.G162.112 Capsicum annuum HOM05D015394 ORTHO05D017774 3.3e-07 60.1 256 28.9
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 7.3e-07 58.9 202 31.7
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 9.6e-07 58.5 166 34.9
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.3e-06 58.2 93 43.0
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 2.8e-06 57.0 298 29.9


User provided reference genes

Program Settings