Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.3e-41 171.8 86 100.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 8.2e-31 136.7 86 77.9
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 4.5e-29 131.0 86 76.7
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.7e-28 129.0 86 73.3
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 2.9e-28 128.3 86 74.4
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 5.0e-28 127.5 86 74.4
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 8.5e-28 126.7 86 74.4
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 8.5e-28 126.7 86 74.4
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 3.2e-27 124.8 86 76.7
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 4.2e-27 124.4 86 69.8
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 4.2e-27 124.4 86 69.8
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 7.2e-27 123.6 86 69.8
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.2e-26 122.9 80 73.8
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.6e-26 122.5 86 72.1
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 4.7e-26 120.9 86 73.3
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-26 120.6 87 69.0
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-26 120.6 87 69.0
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-26 120.6 87 69.0
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-26 120.6 87 69.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-26 120.6 87 69.0
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 6.1e-26 120.6 86 68.6
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 8.0e-26 120.2 86 69.8
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 3.0e-25 118.2 86 72.1
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 5.2e-25 117.5 86 70.9
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 5.2e-25 117.5 86 72.1
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 8.8e-25 116.7 84 69.0
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 8.8e-25 116.7 86 69.8
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 8.8e-25 116.7 86 68.6
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-24 116.3 87 67.8
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.0e-24 115.5 86 67.4
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.0e-24 115.5 86 68.6
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.3e-24 114.8 86 69.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 3.3e-24 114.8 86 62.8
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 4.4e-24 114.4 86 67.4
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 4.4e-24 114.4 85 67.1
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 5.7e-24 114.0 86 66.3
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 5.7e-24 114.0 80 71.2
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 5.7e-24 114.0 86 66.3
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 7.5e-24 113.6 86 68.6
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 9.7e-24 113.2 86 64.0
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.3e-23 112.8 86 64.0
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 2.8e-23 111.7 86 66.3
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 3.7e-23 111.3 86 65.1
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 4.8e-23 110.9 86 66.3
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 4.8e-23 110.9 86 65.1
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 4.8e-23 110.9 86 65.1
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 1.4e-22 109.4 91 61.5
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 62.8
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 62.8
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 65.1
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.8e-22 109.0 83 66.3
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 2.4e-22 108.6 88 62.5
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 61.6
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 62.8
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 7.0e-22 107.1 86 60.5
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 9.1e-22 106.7 87 60.9
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 64.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 60.5
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.2e-21 106.3 85 65.9
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.6e-21 105.9 86 59.3
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 3.5e-21 104.8 86 60.5
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 3.5e-21 104.8 85 57.6
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 62.8
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 57.0
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 5.9e-21 104.0 87 58.6
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 1.0e-20 103.2 86 59.3
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.0e-20 103.2 83 63.9
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.3e-20 102.8 83 61.4
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.3e-20 102.8 87 60.9
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.7e-20 102.4 86 59.3
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.2e-20 102.1 79 60.8
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.2e-20 102.1 86 62.8
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 62.8
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 5.0e-20 100.9 86 60.5
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 55.8
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 57.0
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 8.5e-20 100.1 75 68.0
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 60.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 57.0
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 57.0
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 58.1
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.5e-19 99.4 83 60.2
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.9e-19 99.0 74 64.9
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 2.5e-19 98.6 85 60.0
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 55.8
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 4.2e-19 97.8 86 55.8
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 4.2e-19 97.8 87 59.8
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.2e-19 97.8 86 61.6
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 4.2e-19 97.8 82 61.0
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 1.2e-18 96.3 81 61.7
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 2.1e-18 95.5 87 56.3
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 3.6e-18 94.7 83 57.8
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 6.1e-18 94.0 86 53.5
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 8.0e-18 93.6 85 55.3
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.0e-17 93.2 86 57.0
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 8.8e-17 90.1 88 60.2
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.5e-16 89.4 82 53.7
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 2.6e-16 88.6 86 58.1
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 3.4e-16 88.2 82 52.4
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 3.7e-15 84.7 89 52.8
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 3.7e-15 84.7 174 36.2
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 4.8e-15 84.3 66 57.6
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.6e-13 79.3 86 47.7
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.6e-10 69.3 88 52.3
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 8.0e-10 67.0 51 68.6
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 8.0e-10 67.0 91 39.6
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 2.3e-09 65.5 52 59.6
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 4.0e-09 64.7 42 73.8
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 1.2e-08 63.2 93 38.7
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 2.0e-08 62.4 41 70.7
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 3.4e-08 61.6 42 73.8
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 7.5e-08 60.5 66 48.5
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.3e-07 59.7 65 50.8
SHI06100 Sapria himalayana HOM05D006634 ORTHO05D008282 6.3e-07 57.4 43 69.8
Ah.01g002900 Amaranthus hybridus HOM05D006634 ORTHO05D008282 8.3e-07 57.0 36 66.7
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 8.3e-07 57.0 60 56.7
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 7.0e-06 53.9 37 73.0


User provided reference genes

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